KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_52108
Entry
COCSUDRAFT_52108  CDS       T02914                                 
Name
(RefSeq) Rab7/RabG-family small GTPase
  KO
K07897  Ras-related protein Rab-7A
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl04144  Endocytosis
csl04145  Phagosome
csl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    COCSUDRAFT_52108
   04145 Phagosome
    COCSUDRAFT_52108
   04148 Efferocytosis
    COCSUDRAFT_52108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csl04131]
    COCSUDRAFT_52108
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csl04147]
    COCSUDRAFT_52108
   04031 GTP-binding proteins [BR:csl04031]
    COCSUDRAFT_52108
Membrane trafficking [BR:csl04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    COCSUDRAFT_52108
Exosome [BR:csl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCSUDRAFT_52108
  Exosomal proteins of other body fluids (saliva and urine)
   COCSUDRAFT_52108
  Exosomal proteins of colorectal cancer cells
   COCSUDRAFT_52108
  Exosomal proteins of bladder cancer cells
   COCSUDRAFT_52108
GTP-binding proteins [BR:csl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    COCSUDRAFT_52108
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase cobW ATP_bind_1 AAA_16 PduV-EutP NTPase_1 nSTAND3 AAA_7 Septin AAA_24 AAA_22 MCM SRPRB ATPase_2 NB-ARC DAP3 NACHT TniB ATP-synt_ab RuvB_N
Other DBs
NCBI-GeneID: 17045266
NCBI-ProteinID: XP_005651795
JGI: 52108
UniProt: I0Z9D2
AA seq 208 aa
MGARQTKRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVT
MQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSQKTFENLDNWRDEFLIQASPSNPDNF
PFVVLGNKVDMDEGRSRVVTEKKAKQWCTAKGGIPYFETSAKEDLNVDSAFQCIARNALK
NETEEELYMPDTVDMNAQAIPKRNSSCC
NT seq 627 nt   +upstreamnt  +downstreamnt
atgggtgcaaggcagacgaagagaacccttttgaaagtcatcattctgggggactcaggc
gttggtaaaacatcactgatgaaccagtatgtcaacaagaagttttccagccagtacaag
gctaccatcggggccgacttccttactaaagaggtccaggtcgacgatcggctggtgacc
atgcagatatgggatacggctggacaggaacgcttccagagcctgggtgtggcattctac
cgtggagctgactgctgcgtgctggtgtacgatgtgaactcgcagaagaccttcgagaac
ttggataactggagggatgagtttctgatacaggcgagtccatccaacccagacaacttc
ccttttgtggtcttgggcaacaaggtggacatggatgaaggtcgcagtcgggtggtgaca
gagaagaaggccaagcagtggtgcacagccaagggcggcattccctactttgagacatct
gcaaaggaggacctgaacgtggacagcgcgttccagtgcatagcccgcaacgcccttaaa
aacgagaccgaggaagagctgtacatgccagacacagtcgacatgaatgcacaggccatc
cccaagcggaacagctcctgctgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (126)   
   KEGG ORTHOLOGY (1)   
   RefGene (121)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (26)   
   Pfam (26)   
All databases (163)   

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