KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_53019
Entry
COCSUDRAFT_53019  CDS       T02914                                 
Name
(RefSeq) DEAD-domain-containing protein
  KO
K14806  ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csl01009]
    COCSUDRAFT_53019
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_53019
Enzymes [BR:csl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     COCSUDRAFT_53019
Protein phosphatases and associated proteins [BR:csl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     COCSUDRAFT_53019
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    COCSUDRAFT_53019
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-GeneID: 17042632
NCBI-ProteinID: XP_005649174
JGI: 53019
UniProt: I0Z1W1
AA seq 593 aa
MLEMQNFTVQLCLQERGFVSFIDERKTMRYATKRKVKEEDSSKQKKVKFKEINFVTPTRI
QQAAIPVLLRGRDALVNAPTGSGKTLAYLAAIVNDLQAQEPRVSRAEGTHALIVVPTREL
CLQIADVLTLILRRYIWLVGGAIYGGENRAKEKARLRKGVTVLVATPGRLLDHLQNTQSF
RTEELRWLVLDEADRLLDLGFEQKIGKAPCDGAGDILAITDKRTAEAGNRRRQTVLLSAT
LHSKLDSLASLSLQNPAAIGFQVQAVEGHLHITSAEGQDDGGNAAASSAHTADREQFHIP
TLLKQRVVEVPSKMRLVVLAALLRQICAAQRAAKVVLFMSSCDAVEFVHQMFSEVFELVD
GEPLLPTTIFKLHGNLAQGVRTHTFLEFSRCKSGVLICTDVAARGLDFPEVTSIIQYDPP
GEASEYVHRVGRTARMGKVGEAFLFLLPCERGYLAKLEATGVRLQPINLLAALDLLPGAQ
GQQGRPGRTLDTHTGAHALQARLGEAVSADPGLRSLAADAFRSSVRAYAAHPAALKDVFH
VKRLHLGHVAHSFALREAPSMLGKSSNKAELKRKKAEERGGKKVLPGKLRKRK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgcttgaaatgcagaattttacagtccagctgtgcttgcaggagaggggattcgtgtct
ttcatcgacgagcgaaagactatgcgctacgccaccaagcgcaaagtcaaggaggaagac
agttccaagcagaagaaagtcaaattcaaagagatcaacttcgtgacgccgacacggata
cagcaggccgccattccagtgctcctgaggggccgggacgcgctcgtaaacgcgccgact
ggttccggcaagacgctggcgtatttggcggccattgtgaatgatctgcaggcgcaggag
ccgcgcgtgagccgggcggagggaacgcatgcgctcatcgtggtgcccacgcgcgagctc
tgcctccagatcgccgacgtgctcaccctcatcctccgccgctacatctggctggtgggc
ggggcgatatatggcggggagaaccgggcaaaggagaaggcgcggctgcgcaagggtgtg
acggtgctggtggccaccccggggcggctgctggaccacctgcagaacacgcagtccttc
cgcaccgaggagctgcgctggctcgtcctcgacgaggccgaccgcctgctcgacctcggc
ttcgagcagaagattggcaaagctccttgcgatggtgcaggtgacatactcgccatcact
gacaagcgcacagcagaggccggcaacaggcggcggcagacggtgctgctgtcagccacc
ctccactcgaagctggacagcctggcatctctcagcctgcagaaccccgccgcaattggc
tttcaagtacaggcggtggagggacacctgcacatcacatctgctgaagggcaagatgac
ggaggcaacgccgcggcatccagcgcccacacagctgacagagaacagttccacatcccc
acactcctgaagcagcgggttgtagaggtgccgagcaagatgcggctggtggtgctggcg
gcgctgctgcgccagatctgcgcagcgcagcgcgcggccaaggtggtgctcttcatgtcc
agctgcgacgcggttgagtttgtgcaccagatgttctccgaggtcttcgagctcgtggac
ggcgagccgctgctgcccaccaccatcttcaagctgcatggcaatctggcccagggggtg
cgcactcacacgttcctggagttctcccggtgcaagagcggcgtgctcatctgcactgac
gtggcggcgcgcggcctggacttcccagaggtcaccagcatcatccagtatgacccgccc
ggcgaggcctcagagtatgtgcaccgggtgggccgcactgcgcgcatgggcaaggtcggg
gaggcgttcctgttcctgctgccctgcgagcgcggctacctggccaagctggaggcaacc
ggcgtccgcctgcagcccatcaatctgctggctgcgctcgacctgctgccgggggcccag
gggcaacaggggcggccagggcggacgctggacacgcacacgggggcgcacgcgctgcag
gcgcgcctgggggaggccgtgtcggcggacccgggcctgcgtagcctggcggccgatgcg
ttccggtcgagcgtgcgcgcgtatgcggcccacccggccgccctcaaggacgtgttccat
gtcaagcgcctgcacctgggccacgtcgcacacagctttgcgctcagggaagcgccttca
atgctcgggaagtccagcaacaaggctgaactgaagaggaaaaaggcggaggagagagga
gggaagaaggtgctgccaggaaagctgagaaagcggaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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