KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_7019
Entry
COCSUDRAFT_7019   CDS       T02914                                 
Name
(RefSeq) DNA glycosylase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    COCSUDRAFT_7019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_7019
Enzymes [BR:csl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     COCSUDRAFT_7019
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     COCSUDRAFT_7019
 Prokaryotic type
     COCSUDRAFT_7019
SSDB
Motif
Pfam: HhH-GPD DUF3035 AAA_30
Other DBs
NCBI-GeneID: 17039564
NCBI-ProteinID: XP_005646124
JGI: 7019
UniProt: I0YT61
AA seq 257 aa
VSISPKSPFPDFVRPTAEECRAARDALALLHGEPRQHKPIDAGTAAAAADSLHTHSQQTV
LDSLVRTILSQNTTDVTSHRAFASLKAAFPGEEGWEDVLRAPPGKMEEAIRMGGLADIKA
ERIKAILATLLEERGKICMEYLREMSDDEIKAELFKGVGKKTVACVLMFCLAREEFPVDT
HVWRISKSLGWVPAKATRDAAYEHLNLHVPADVRYDLHVLMVEHGKRCPRCASNGKPRKE
SHGDCPLRNLKELALRS
NT seq 771 nt   +upstreamnt  +downstreamnt
gtctcgatcagcccaaaatctccgttcccggattttgtgcggccaacagcagaggagtgc
agggcagcacgtgacgccctagctctattgcatggagagccacggcagcacaagccaatt
gatgcaggaacggcagcggccgcagctgacagcctgcacactcactctcagcagacagta
ctggactctttggtcaggaccattctgtcccagaatacaacagatgtcacctctcaccga
gcctttgctagcttgaaggctgcattcccaggagaagagggatgggaggatgtgctgaga
gctcctccaggcaaaatggaggaggcgatacggatgggcggcctcgcagatattaaggca
gagcgcataaaagccatcttggccactttgctggaggaacgaggcaaaatttgcatggag
tacctcagggaaatgtcagacgacgagatcaaagcagaactgttcaaaggcgtcggaaag
aagactgtggcatgtgttctcatgttctgcctggcacgggaggagtttccagtcgacaca
catgtgtggcgcatttcaaaaagcctgggctgggttcctgcaaaggccacccgagacgct
gcctatgagcacctaaatttgcatgtgccagcagacgtcaggtatgacttgcatgtactg
atggtggagcatgggaagcggtgtccaagatgcgcaagcaatgggaagccgcgcaaggag
tcacatggagactgccctctcaggaacttgaaggaactggcattgagatcc

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (88)   

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