KEGG   Cyanobacterium stanieri: Cyast_0158Help
Entry
Cyast_0158        CDS       T02377                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
csn  Cyanobacterium stanieri
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:csn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Cyast_0158
Enzymes [BR:csn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Cyast_0158
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Cyast_0158
DNA repair and recombination proteins [BR:csn03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Cyast_0158
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(171685..172515)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVCRGLNKTTSALIIKSARVLLPRTLAYPDSIASFEQGIAGKKIIQWHRRGK
YLLAQLSRGWLGVHLRMTGQLLWVNQDSALQKHTRVRLFFDEGKELRFVDTRTFGKFWWL
ENDSPPETVVTGLQKLGVEPFSPQFTIQYFQEKLKKSRRNIKTLLLDQSVVAGVGNIYAD
EALFKSGIMPNTISGNLKLPQIEKLRTAIIEVLDDSIKAGGTSFSDFLHITGVNGNYAGK
AWVYGRKGEPCRICSTPIDKMKLGGRSTHFCPQCQS
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagtcgaaacagtgtgtcgaggtctaaataaaacgacttcggca
cttattataaaatctgcgagggtattattgccccgcactctagcttatcctgattctatc
gcttcttttgaacagggtattgcgggtaaaaagattattcaatggcatcgccgaggtaaa
tatttattggcccaattatctcgaggatggttgggggtgcatttacgcatgacagggcag
ttattatgggtaaatcaagatagtgcattgcaaaagcatactagggtaagattgtttttt
gatgagggcaaagaattacgctttgtggatactcgcacctttggcaagttttggtggttg
gaaaacgatagcccccctgaaactgtggtgacaggattacaaaagttgggggttgaacct
ttttctcctcagtttactattcaatattttcaagaaaagttaaaaaaaagtcgccgtaat
atcaaaactctgcttttagatcaaagtgttgtggctggagttggtaatatctatgctgat
gaggctttatttaaaagtggtattatgcccaatactatcagtggtaatttaaagttacca
cagatcgaaaaattaaggactgctatcattgaggtattagatgattctatcaaggcaggg
ggaaccagttttagtgactttctccacatcacaggggtaaatggtaattatgctggtaag
gcttgggtatatggcagaaaaggggaaccctgtcggatttgtagcacccccatagacaaa
atgaagttaggagggcgatcaacccatttttgtccgcagtgtcaaagttaa

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