KEGG   Cyanobacterium stanieri: Cyast_1747
Entry
Cyast_1747        CDS       T02377                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
csn  Cyanobacterium stanieri
Pathway
csn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cyast_1747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csn03400]
    Cyast_1747
DNA repair and recombination proteins [BR:csn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cyast_1747
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cyast_1747
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 AAA_22 AAA_19 Helicase_C_2 UvrD-helicase HEM4 P-loop_SecA DUF5442 DUF2785 ApoLp-III
Other DBs
NCBI-ProteinID: AFZ47703
UniProt: K9YNQ5
Position
complement(1927118..1929115)
AA seq 665 aa
MFQLQAPFKPTGDQPTAIKSIVTALERGDQFHTLLGATGTGKTYTVANAIAHHQKPTLVL
AHNKTLAAQLCEELRQFFPHNAVEYFVSYYDYYQPEAYIPVTDTYIEKTSSINDEIDMLR
HSATRSLFERQDVIVVASISCIYGLGIPSEYLKASVKLAVGAEYDTRQLLRDLVTIQYTR
NDIELARGSFRLKGDVLEIVPAYEDRVIRLDFFGDEIDSISLLDPVDGSFIKELERINIY
PARHFVTPQEQLESAIASIKAELEIRLIELEKQGKLVEAQRLKQKTRYDLEMLQEVGYCN
GVENYSRHLAGRQAGESPECLVDYFPKDWLLIVDESHVTVPQIRGMYNGDQARKRVLIDH
GFRLPSAADNRPLKAEEFWQKVHQCIFVSATPSQWEIDQSEGNISEQIIRPTGILDPEIC
VRPTENQIDDLLGEVKKRVVKNERVLITTLTKRMAEDLTNYLQERGIKVQYLHSEIQSIE
RIEIIQSLRAGEFDILIGVNLLREGLDLPEVSLVVIMDADKEGFLRSEKSLIQTIGRAAR
HVNGEAILYADNLTDSMEKALNETNRRRKLQLAYNKKHNIIPRSISKKSSSSILEFLDIT
RRLNSEQLEKVYDHIEEVTLDKIPDLIKQFEEQMKTYAKDLEFEKAAEMRDKIKNLRAKL
RTVDN
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgtttcaactacaagcgccctttaaacccacaggagatcaacccacggctatcaagtcc
attgtaacagccttagaaaggggcgatcaattccatacccttcttggggcaacgggtaca
ggaaaaacctatacagtggcaaatgccatcgcccatcaccaaaaaccgaccttggtatta
gcccataacaaaacccttgccgcccaactgtgtgaggaattgagacagttttttccccat
aacgccgtcgaatatttcgtcagttattacgactactaccaaccagaagcctatatccct
gttaccgatacctatatcgaaaaaacctcatccatcaacgatgaaatcgatatgttgcgt
cattcggccacccgttcgttatttgagcgtcaagatgtgattgtggtggcttctattagt
tgtatctatggtttgggtatcccctcagaatatctcaaagcctcggtaaaactagcggta
ggggcagaatatgacactcggcaactattaagagatttagtcaccattcaatatacccgt
aacgacattgaactagcacggggtagttttcgccttaagggggatgtgttggaaatcgtc
cctgcctacgaggatcgagtaattcgccttgatttttttggagacgaaatcgactcaatt
tcccttttagaccccgtagatggttcatttatcaaagaattagaacgcattaatatctac
cctgcaaggcactttgtcactccccaagaacagttagaaagtgcgatcgcctctatcaaa
gcagaattagaaattaggctcatagaactagaaaaacaaggaaaattagtagaagcccaa
agattaaaacaaaaaacccgttatgacctagaaatgttacaagaagtaggttactgtaac
ggtgtggaaaactattctcgccatctcgcaggaagacaagcgggggaatcccctgaatgt
ttagtggattattttcccaaagactggttattaatagtagatgaatcccatgttaccgta
ccacaaattagggggatgtataacggagatcaagctagaaaaagagttttgatcgatcat
ggttttcgactgccaagcgctgccgataatcgccccctcaaagccgaagaattttggcaa
aaagtccatcaatgtatttttgtatccgccacccctagccagtgggaaattgaccaatca
gagggtaatatttctgagcaaattattcgccccacaggtattttagacccagaaatttgt
gttagaccaacggaaaatcagatcgatgatttacttggagaagtgaaaaaaagagtagtc
aaaaacgaacgggttttaattacaactctgaccaaaagaatggcagaagatttaaccaat
tatctccaagaaaggggcataaaagttcaatatttacactcagaaatacagtctatcgaa
cgcatcgaaataatccaaagtttaagggcaggggaatttgatattttaatcggagtaaat
ttattaagagaaggcttagacttgcccgaagtttctttggtggtaattatggatgcggat
aaagaaggttttttgcgctctgagaagtctttaattcaaactatcggcagggcggcccgt
catgtcaatggggaagcgattttatatgctgataatttgactgatagtatggaaaaagct
cttaatgaaaccaatcgaaggagaaaattacagttagcttataataaaaaacataatatt
attcctagatctattagtaaaaaatctagtagctctattttagaatttttggatataacc
cgtcgattaaatagtgaacaattagaaaaagtttatgatcacatagaagaggtaacatta
gataagattcctgatttaattaaacagtttgaagaacaaatgaaaacatatgcgaaagat
ttggaatttgaaaaagcagcagaaatgagagataaaattaaaaatttaagagcaaaatta
agaactgttgataactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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