KEGG   Cyanobacterium stanieri: Cyast_2572
Entry
Cyast_2572        CDS       T02377                                 
Name
(GenBank) DNA-directed RNA polymerase gamma chain
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
csn  Cyanobacterium stanieri
Pathway
csn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Cyast_2572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csn03021]
    Cyast_2572
   03400 DNA repair and recombination proteins [BR:csn03400]
    Cyast_2572
Enzymes [BR:csn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Cyast_2572
Transcription machinery [BR:csn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Cyast_2572
DNA repair and recombination proteins [BR:csn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Cyast_2572
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Cas9-BH
Other DBs
NCBI-ProteinID: AFZ48515
UniProt: K9YQ36
Position
2825082..2826968
AA seq 628 aa
MTKQQTRQFDYVKIGIASPERIREWGERTLPNGIVVGEVTTPETINYRTLKPEMDGLFCE
KIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYLKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQVVYFNSYVVLNPGNATNLSYRQLLSEDQWMEIEEQIYAEDSE
LEGIEVGIGAEAVERLLQEIELEEEADKLREEISNSKGQKRAKLIKRLRLIDNFIATGSK
PEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLQEILAPEIIIR
NEKRMLQEAVDALIDNGRRGRTVVGGNNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLQIYQCGLPREMAIELFQPFVINRLIRIGIVSNIKAAKKLIIKGDPSIWKVLE
EVITGHPVLLNRAPTLHRLGIQAFEPVLVEGRAIQLHPLVCPPFNADFDGDQMAVHVPLS
IEAQAEARLLMMACHNILSPATGKPIIAPSQDMVLGCYYLTAENPAATKGAGSYFANLED
ALKAYEQDLVDLHAYVWVRFDGGVDGSHPNDEPEKVEELSDGSVWKYYSDRKVRETAEGE
QIAQYIHTTPGRIIYNKTIIDALDFEAV
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgacaaagcaacaaacaagacagtttgactacgtaaaaatcggcatcgcctccccagaa
agaatcagagaatggggcgagcgcaccttacccaatggtattgtcgtcggtgaagtcaca
actccagagactattaattatcgtaccctcaagcccgaaatggatgggctattttgtgag
aaaatttttggtccttccaaggattgggaatgtcactgcggaaaatacaaaagagtacgt
cataggggcattgtctgcgaacgttgtggggttgaggtgacagagtctagggtgcgccgt
catcgtatgggctaccttaaattggccgctcctgttacccatgtttggtacttaaaaggg
attcctagttatttgagtattctcctcgatatgccccttcgggatgtggagcaggtagta
tatttcaactcctatgtggtactcaaccccggtaacgccaccaacctaagctatcgtcaa
ttgctcagtgaagatcaatggatggaaattgaagagcaaatttatgccgaagattccgag
ttagaaggtatcgaggtaggcattggtgccgaagccgtagagcgtttattacaagaaatt
gagctagaagaagaagctgataaattaagggaagaaatcagcaatagtaaaggacaaaaa
agagcaaaactcattaaaagattacgcttaattgataactttattgccacaggttcaaaa
cctgaatggatggttttaagtgtaattcccgtcattcctcctgatttacgccccatggtg
cagttagatggtggtcgttttgctacctctgatttaaatgatttataccgtcgtgtaatc
aaccgtaataaccgtttaaaacgcttacaggaaattctcgcccccgaaatcattatccgt
aatgaaaaacggatgttacaagaggcggtggatgctctgattgataatggtaggagaggg
cgtactgtggtaggtggtaataatcgccccctcaaatccctttctgatattatcgaaggt
aaacagggtcgtttccgtcaaaaccttttgggtaaacgggttgactactcaggacgttcg
gtaattgtggtcgggcctaatttacaaatttatcagtgcggtttgcctagggaaatggcg
atcgaacttttccaaccttttgttattaaccgtcttatccgtatcggtattgtcagcaac
atcaaggcagccaaaaaattaatcattaaaggtgatcccagtatctggaaagtattggag
gaagtaattacaggacaccccgtattactcaaccgtgcgccgactctccaccgtttaggt
atccaagcctttgaacctgtgttggtggaaggacgagccattcaacttcatccccttgta
tgtcctccctttaacgctgactttgacggtgaccaaatggcggtacacgtacccctatcc
attgaagcccaagcagaagcccgtttgttgatgatggcttgtcataatatcctttctcct
gccacaggtaagccgattattgccccttctcaggatatggtattaggttgttattatctc
acggcagaaaaccctgccgccactaagggcgctggaagttatttcgctaaccttgaggat
gccctcaaggcttatgaacaagatttagtagatttacacgcctatgtgtgggtgcgtttt
gatgggggtgtggatggtagtcatcccaatgatgaacctgaaaaagtggaagaattgtcc
gatggtagtgtttggaagtattatagcgatcgcaaggtacgcgaaaccgcagagggtgaa
caaatcgcccaatatatccataccaccccaggacggattatttacaacaaaaccatcatt
gacgctttagattttgaagctgtctaa

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