KEGG   Clostridium saccharoperbutylacetonicum: Cspa_c04630
Entry
Cspa_c04630       CDS       T02467                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
csr  Clostridium saccharoperbutylacetonicum
Pathway
csr03420  Nucleotide excision repair
csr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cspa_c04630 (pcrA)
   03430 Mismatch repair
    Cspa_c04630 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csr03400]
    Cspa_c04630 (pcrA)
Enzymes [BR:csr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Cspa_c04630 (pcrA)
DNA repair and recombination proteins [BR:csr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cspa_c04630 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     Cspa_c04630 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor Intein_splicing UvrD_C_2 Viral_helicase1 AAA_30 DUF5604 AAA_14 ResIII GIY-YIG DEAD
Other DBs
NCBI-ProteinID: AGF54281
UniProt: M1MH80
Position
532720..536058
AA seq 1112 aa
MDLKSLLNKEQYEGATTIDGQVLILAGAGSGKTRVLTHRIAHMIEDLNIAPYSILAITFT
NKAAKEMKDRVKALIGEQAENMWISTFHSTCVRILRREIDKIGYKSSFTIYDSSDQKILV
KECMKTLNINDKDITEQEILGKIGKAKDNMQGTRSYMLENEANFREKKIADVYEMYQKRL
KENNALDFDDLIFKTVELFKNNPDVLEFYQNKFKYIMVDEYQDTNGAQYQLVKLLASKYK
NICVVGDDDQCMVEGTLVSAEGKDIKIEELNKDDLIQVAAGNGETCLLPVSEISKRRYSG
DIIRLTTSGGKVIKATPNHLSFGRIVLDDEKYYVYLMYKKNFGYRIGQTSSIRSRKGSEA
SGLAVRLNGEQADKMWVIKACPSKGEASYYEQYYSVKYGIPTMVFNSRGRNITVSQDQIE
RLFKEIDTVSAAERLMDEEYLYKEYPHHLSGAVIRGESIRKRINLSFFGGKKSIQRGLYS
HRIGLNSSGEEFKEKFIEAGFNVRDGKRNTYRVETERALYDEAEEFVKKLSGVEEEFEIL
RKAKLTENNNFMFMPIGSFKEGMSIAVYNNGVIEEDVVASVEIEQYDGYVYDLNINDARN
YIANNVVVHNCIYQWRGADIKNILDFEKDYPGAKVIKLEQNYRSKGNILNAANVVIVNNS
NRKSKVLRTEQEEGNKIKIYRAYADSDEGDFVGKQIQDLKNKQGKNYNDFAILYRTNAQS
RIFEESFRRKGIPYKIVGGTRFYDRKEIKDMLAYLKVLINPQDDISLKRIINVPKRSIGD
ATVSKVQEFAGNFELNLWDAITEVRSIPTLTARNVSTIEPFVELMENLMDLSKTMPVSVL
IEAILKDTGYMKQLQESNEIEDKSRIENLKELVSDAVDFEKSSEDKSLSAYLERVSLVQD
TDKIEEEDDAVVLMTIHSAKGLEFPVVFMVGMENGIFPGMASFEKESEMEESRRLCYVGI
TRAKEILFMTSAEVRRVFGKTVAYSQSDFINEIKPELKEYVGVEKANVMSREKLMNNSYN
NPHSLRNTMSRGNSFSGSNGTSAVSSGVTNEAGSEYITSNEATLGRKVMHEKFGKGTIVS
VQASGSDKKLTVAFDKQGVKTLMLSLAKLKMM
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggatttaaaatcattacttaataaagaacagtatgaaggggcaactacaattgatggg
caggtacttatattagctggagcaggttctggtaagacaagagttttaactcatagaatt
gctcatatgattgaggacttaaatattgcgccatatagtatattagctatcacttttaca
aataaggctgcaaaggaaatgaaggatagagttaaggctcttattggtgaacaggctgaa
aacatgtggatatccactttccattcaacatgtgttaggattttaagaagagaaatagat
aagataggctacaaaagcagctttacaatatatgatagttcagaccaaaaaatattagta
aaagagtgtatgaaaactttaaatattaatgataaggatataactgagcaagagatatta
ggaaagataggaaaagcaaaggataatatgcaagggactcgaagctatatgttagaaaat
gaagctaactttagggaaaagaaaattgcagatgtctacgaaatgtatcaaaaaaggctg
aaggaaaacaatgccttagattttgatgatcttatatttaaaactgttgaattgttcaaa
aataatcctgatgttttagaattttatcaaaataaatttaagtatattatggtggatgaa
tatcaagatacaaatggagcacaatatcaattggtaaaattgcttgcttcaaaatataag
aacatatgtgttgtgggcgatgatgatcaatgtatggttgaaggaacattagtatcagca
gagggtaaggatataaaaatagaagaattaaataaagatgatttgattcaagttgctgca
ggaaatggagaaacatgtttattgcctgttagtgagataagcaagagaagatattcaggt
gacataataaggctaactacaagcggcggaaaagtgataaaggcaactccaaatcattta
tcttttggaagaatagtattagatgatgaaaaatattatgtatatttaatgtataagaaa
aattttggctacagaataggtcaaacttcttcgataagaagcagaaaaggcagtgaagct
agtgggttagcagtaagactaaatggagaacaggcagataagatgtgggtaataaaggct
tgtccttcaaaaggagaagcatcttattatgaacaatattattctgttaaatatggaata
ccaacaatggtattcaactcaagaggcaggaatataactgtttctcaagatcagatagag
agattatttaaagaaattgatactgtatctgctgcagaaagattaatggacgaagaatat
ttatataaggaatatcctcatcacttaagtggtgcagtaataagaggcgaatcaattaga
aaaagaattaatttaagcttttttggaggaaagaaatctattcaaagaggactttattct
cataggataggattaaattcttcaggagaagagtttaaagaaaaattcatagaagctgga
tttaatgttagagatggtaagagaaacacatatagagtggagacagaacgagctttatat
gatgaagcagaagaatttgtgaaaaagttaagcggggtagaagaagagtttgaaatacta
agaaaagcaaaacttacagaaaataataactttatgtttatgcctattggaagttttaaa
gaaggcatgtctattgctgtatataataatggagtaattgaagaagatgttgtagcttct
gttgagatagaacaatatgatggttatgtttatgatttaaatatcaacgacgcaaggaat
tacattgctaataatgttgtggttcataattgtatttatcaatggagaggtgctgatatt
aaaaatatactagacttcgaaaaagattatccaggagcaaaggtaataaaattagagcaa
aattatagatctaagggtaacatattaaatgctgcaaatgttgtaattgttaataactca
aacagaaagagtaaagtactaagaactgaacaagaagaaggaaataagataaagatatat
agagcttatgcagatagtgatgaaggtgattttgttggaaaacaaattcaagaccttaag
aataagcaaggtaaaaactataatgattttgctattctatatagaacaaatgctcaatcg
agaatttttgaagaaagttttagaagaaaaggaatcccttataaaattgtagggggtaca
agattctatgatagaaaagaaataaaagatatgttagcatatttaaaagttcttattaac
ccgcaagatgatattagtcttaaaagaattataaatgtacctaagagaagcattggagat
gcaactgtatctaaggttcaagaattcgcaggtaattttgaacttaatttatgggatgca
ataactgaagttagaagcattccaacccttacagctagaaatgtttcaacaatagaacca
tttgtggagcttatggaaaatctgatggatttaagtaaaacaatgcctgtatcagtatta
attgaagctattttgaaagatactggatatatgaagcaattacaagaatcaaatgagatt
gaagataagagtagaattgaaaacttaaaggaattagtatctgatgctgttgactttgaa
aagagcagtgaagataaatctttatctgcatatttagaaagagtttctttagttcaagat
actgataaaattgaagaagaggatgatgcagttgtccttatgacaattcatagtgcaaag
ggattagaatttccagttgtatttatggtaggtatggaaaatggaatattcccaggaatg
gcatcctttgaaaaagaatctgagatggaagaatcaagaagattgtgttatgttggtata
actagagctaaagaaatattgtttatgacatcagctgaagttagaagagtgtttggaaaa
actgtagcgtattctcaatcagattttataaatgaaataaaaccagaacttaaggaatat
gtaggtgtagaaaaggcgaatgttatgagtagagagaaattaatgaataactcatacaat
aatccacacagcttaagaaatactatgagcagaggaaatagtttttcaggaagcaatgga
acaagtgcagttagtagtggtgttactaatgaagctggctcagaatatataacaagtaat
gaagcaacccttggtagaaaagtaatgcatgaaaaatttggcaaaggaactattgtttca
gttcaagcttcaggtagtgataagaaactgacagtagcttttgataagcaaggtgttaaa
acattaatgctatctttggcaaaattaaaaatgatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system