KEGG T01334: CLOST

Clostridium sticklandii: CLOST_2355

Entry

CLOST_2355 CDS T01334

Definition

DNA-binding protein

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cst Clostridium sticklandii

Pathway

cst03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cst03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 Helicase_RecD PIF1 AAA_22 T2SE PhoH TrwB_AAD_bind DUF2075 AAA_14 AAA DEAD AAA_12 DUF2442 AAA_16 KaiC AAA_28 NB-ARC SRP54 MGS Zeta_toxin FtsK_SpoIIIE DUF258 AAA_29 AAA_25

Other DBs

NCBI-GI:

310659656

NCBI-GeneID:

9855450

UniProt:

E3PUN4

Position

complement(2477112..2479355)

AA seq 747 aa
MPIELKGKISDIIFQNDENGYTIANLISDELGEVTVVGCMPSVRELDNIQVSGEWKTHDI
YGRQFSVMSFTHMAIDSLDGIIAYLASGTIEGIGLKMAHKITDKFGIKAIEILETNPNRY
LEIEGIGRKKLDKMISSHMEGRQLKSIITAFSPYGISPAYCMKIYKKYADKSIDMVMNNP
YGLCKDVKGIGFKKADEIAKKLNAGLDSLERIEEGIKYLLQEAAYSGHTYMLMPQLVSKA
KELLSIDEEEILSCLNQMAINGGITIEEVDIEQRIYLDSYNLAETRAASNLIKLAYMNEL
ENQEKTIEQLELEEDIELSELQKKAVTMALENKMMILTGGPGTGKTTTLSFIIKSFEQMK
RKIILCAPTGRAAKRMSQATLRPASTIHRLLEAVYSEEADGLIFQKDEDDPIAADVIIVD
EVSMMDVMLLDSLLLAVSENTAVIFVGDKDQLPSVGAGRVLQDMLESNTIPSIELTEVFR
QAKQSMIIVNAHKINKGELPITDQKNTDFFFMAKKTPSQIAELIVELVSDRLPKYYKLSS
NNIQVLSPMRKSEAGVLNLNLLLQEALNPARQGKREHKAGNRTFRTGDRVMHIKNNYEKT
WENLEENISGEGIFNGDLGYIDFIEPSEKKLYIQFDDGKRAEYDFTELDQIEHAFATTVH
KSQGSEFDCVVMPVSAFPPMLMSRKILYTALTRAKKLAILVGDAKYLKAMISNVYEEKRN
TALSDKLKLYKETGMLLEENNGATVPF

NT seq 2244 nt +upstreamnt +downstreamnt
atgcctatagaattaaaaggaaaaatttcagatataatatttcaaaacgatgaaaatggc
tacactatagcaaacctaatcagcgatgaacttggagaagttacagtggtgggctgtatg
ccatctgtcagagagctcgacaatatacaggtcagtggagagtggaagactcacgatata
tatggcagacagtttagtgttatgagcttcactcatatggctatagattcgctagatgga
atcatagcctacctagcatctggaacgatagaaggcataggtcttaaaatggcacataaa
atcacagataaattcgggataaaagctatagaaatcctagaaactaatcctaatagatat
ttagaaatagaaggcataggcagaaaaaagctcgataaaatgataagctctcatatggaa
ggaagacagctaaaatccataataacagcattttcgccatatggaataagcccagcctac
tgcatgaaaatctataaaaaatatgcagataaatccatagatatggtcatgaacaatccc
tacggtctatgtaaggatgtaaaagggatagggtttaaaaaagctgatgaaatagcaaaa
aaattaaatgctggacttgattctttagaaagaatagaagaaggcattaaatacctgctt
caagaagctgcatatagtggacatacatatatgctaatgcctcagctagtatcaaaagcc
aaggaactgctatcaatagatgaagaagaaattctatcttgcttgaatcagatggctata
aatggaggcataaccatagaagaagtagatatagagcaaagaatctatttggattcctat
aacctagcagagacaagagcagctagcaacctaataaagctggcatatatgaacgagctt
gaaaatcaagaaaaaaccatagagcaattagagctagaagaagatatagagctgtcagag
ctacaaaaaaaagctgtgactatggcacttgaaaacaaaatgatgatattaactggtggc
ccaggaactggaaaaacgactactcttagctttataatcaaaagctttgaacagatgaag
agaaaaattatcctctgcgcaccgacaggaagagcagcgaagcgtatgtcgcaggcaacc
ttgagaccagcctctacgattcatagactactagaggcagtatatagtgaagaagcagat
ggtcttatatttcaaaaagacgaagacgaccctatagccgctgatgtaataatagtagat
gaggtttctatgatggacgtgatgctcctagatagcttgcttcttgccgtatcagagaac
acggcggttatatttgtaggagacaaagaccagcttccatcagtaggagctggaagagtc
ctacaggatatgctagagagcaataccatacctagtatagagcttacagaagtatttaga
caggcaaagcaaagcatgataatagtcaatgcccacaaaataaataaaggtgagcttccg
atcacagaccaaaaaaatacagacttcttttttatggcaaagaaaactccgtctcagata
gcagagctaatagtagagctagtttcagatagactgccaaagtactataaactatcatca
aataatattcaggtactgtcacctatgagaaaatcagaagctggagtacttaatctaaac
ctcttactacaagaagcactcaatccagcaagacaaggcaaaagagagcataaagcggga
aatagaacttttagaacgggcgatagggtaatgcacataaaaaataactatgaaaaaacc
tgggaaaacttagaagaaaatatttctggagaaggaatatttaacggcgatttaggatat
atagacttcatagagcctagtgaaaaaaaactctatattcagtttgacgatggtaaaaga
gcggaatatgactttacagagctagatcagatagagcatgcatttgctactactgttcat
aaaagccaaggctctgagtttgattgcgtagtcatgccagtatcagcttttcctcctatg
ctcatgagcagaaagattctctacacagcacttacaagagcaaaaaaactagcaatacta
gtaggtgacgcaaaatacctaaaggctatgatatccaatgtctacgaggaaaagagaaat
accgccctatctgataagttaaaactttacaaagaaactggtatgctactggaggagaat
aatggagctactgtacccttctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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