KEGG   Candidatus Caldarchaeum subterraneum: CSUB_C0440
Entry
CSUB_C0440        CDS       T02904                                 
Name
(GenBank) translation initiation factor IF-2 unclassified subunit
  KO
K03243  translation initiation factor 5B
Organism
csu  Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:csu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:csu03012]
    CSUB_C0440
Translation factors [BR:csu03012]
 Eukaryotic type
  Initiation factors
   eIF-5
    CSUB_C0440
SSDB
Motif
Pfam: GTP_EFTU_D4 GTP_EFTU IF-2 Intein_splicing GTP_EFTU_D2 MMR_HSR1 ATP_bind_1
Other DBs
NCBI-ProteinID: BAJ50301
UniProt: E6N593
Position
complement(422167..424413)
AA seq 748 aa
MSYREPIVVVLGHVDHGKCVAPWTLVHEAGEGYVSAEDIFTRYTRDGRVYHVSDGVAVEP
AKKPRLATLTGNNEAEAVMLWRRQAPETVIRIHFSNGETVETTPEHPYARAYSSSFYIFT
RADRLRPGDRVLSMRKNQVASVAVENVEQVKPCYPYVYDFTVPPTHFYEAQEIILHNTSL
LDKMRGTLVAAREAGGITQHIGATIFPIRAIEETCRQLLGELKVKLEIPGILFIDTPGHA
AFSNLRKRGGSVADMAILVVDVMKGVQEQTRESIQLLRSRKTPFVVAANKIDMITGWRPT
PNAPFIKTYNNQHKTVAEDLDNRIYNLMGELSFLGFRSDLYTRIRSFTDTVAIVPVSAKT
GEGIPDLLLLLLGLAQQFMKQRLMKKDDRCEGVILEIVEEEGFGATANILIHTGTLRVGD
KVAFLTRRGPITSRVKALLLPKPLDEIRDPRDRLKNISQISAAAGVKMVAEMLEEAVAGS
PILAVKNEEEDLRRVAEEAQEFILSTDKIGVVVKADALGTLEAAVNYLREKGVLIRLADI
GDVSKRDVVEAHVVRQKDELLGVILAYGVRVDPELEYEAQSKGVRIFKNDVLFRLIEDYE
KWVADTIRARQAAEFESLVKPGKIKILKDFIFRRSEPAIVGVEVVAGEVRPGVQLVNKTG
KTVGQLSQIQDRGQAISLAKAGMKVAVSIRDAVVGRTIHGDEELYVAVPERDARQLLTTY
AAMLEPHALRALEELVEIMRVKNPLWAR
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgagctaccgagagccgatagtggttgtactgggccatgtggaccatggaaaatgcgtg
gccccatggacacttgtacatgaggctggtgagggatacgtctctgcggaggatatcttc
acaagatataccagggacggtagagtttatcatgtttctgatggggtggcggttgagccg
gctaagaaacctcgcctcgcgaccttgaccgggaacaacgaggcggaggcggtgatgctc
tggagacgtcaagcacccgagaccgttatccgaatacatttctcgaacggggaaactgtg
gagacaacacccgaacatccctacgcaagagcttacagcagctcattctacatcttcaca
agagcagacaggttaaggccgggggacagggtattgagcatgagaaaaaaccaagtcgca
tccgtggctgttgaaaacgttgaacaagtcaaaccctgctacccctacgtgtatgacttc
actgttccgccgacacatttctacgaagcccaagaaatcatacttcacaacacttctcta
ctggataagatgaggggaactctcgtggcagcgagagaggccggcggcataacacaacac
ataggggccacgatattcccgataagagccatagaagagacatgtcgacagctgcttggc
gagctcaaagtcaagctcgagattcccggcatcctcttcatcgatacgccgggccacgcg
gctttctcaaacctcaggaaacgcggaggctctgtcgcagacatggcgatactggtcgtc
gatgttatgaagggtgttcaggagcagacgagggaaagcattcagctgctacgctcaaga
aagacaccatttgtggtagccgccaacaaaatcgacatgataacgggatggaggccgact
cccaacgccccattcataaaaacctacaacaaccagcataaaacagtcgccgaagacctt
gacaacaggatatacaacttgatgggggagctaagcttcctaggtttcaggtccgacctc
tacacacggataaggtcattcacagacacggttgcaattgttcccgtgagcgccaagaca
ggcgaaggcatacccgaccttctcctgcttctcctcggacttgcgcagcaattcatgaaa
cagcgtctcatgaaaaaagacgaccgatgtgaaggcgtcattctcgaaatagtcgaggaa
gagggcttcggagcgacagccaacatcctcatccacacaggaactttaagggtcggcgat
aaggttgctttcctcacacgcagaggaccaataacctcgagggttaaggcgctgctgtta
cccaagcctctcgacgagatacgcgacccgcgggacaggttgaagaacatcagccaaatc
tcagcggcagcaggtgtcaagatggttgcggaaatgcttgaggaagcagtggccggctca
cccatcctagctgttaaaaacgaagaggaggaccttaggcgggttgcggaggaggctcag
gagtttattctctcaactgacaagataggtgtggtggtgaaggccgacgcgcttggaaca
ctcgaggccgcggtcaactatctccgcgaaaaaggtgtattaatccggttggccgacatc
ggagatgtctctaaacgcgacgtggttgaggcacatgttgttcgccagaaagacgaatta
ctcggcgtcatcctcgcctacggagtaagggtagaccccgaacttgagtacgaagcacag
tctaagggtgtgcgcatcttcaaaaacgacgttctctttcgtctcatcgaagattatgag
aagtgggtcgccgacactatcagggcgagacaggcggctgagttcgagtcgctggtgaag
ccgggaaagataaagatactcaaggactttattttcaggcgtagtgagccggcgattgtg
ggtgtggaggttgtggcgggcgaggttcggccgggtgtgcagctggtaaacaaaacgggg
aaaacagtgggccagctctctcagatacaggacagagggcaggcgataagcctcgcaaag
gcggggatgaaggtcgctgtctctataagagacgcagttgtaggccgcacaattcacggc
gacgaggagctttacgtggccgttccagagcgagacgcccgacagcttctcaccacctac
gcagccatgctggagccacatgctctcagagccttggaagaattagtcgagataatgcgt
gtcaaaaacccgctctgggcgaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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