KEGG   Candidatus Caldarchaeum subterraneum: CSUB_C0955
Entry
CSUB_C0955        CDS       T02904                                 
Name
(GenBank) probable transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
csu  Candidatus Caldarchaeum subterraneum
Pathway
csu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CSUB_C0955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csu03021]
    CSUB_C0955
Transcription machinery [BR:csu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CSUB_C0955
 Prokaryotic type
  Archaeal type
    TFB
     CSUB_C0955
SSDB
Motif
Pfam: TFIIB Cyclin_N HD_4 DUF4158
Other DBs
NCBI-ProteinID: BAJ50808
UniProt: E6N6Q7
Position
complement(925339..925956)
AA seq 205 aa
MRLDELLTSYANAFSLPNHVVDLAREMLERLRRMGLSQGRNGETLVAAVLYIACKQSQHP
VQLKDMLQRKKGFLKTLRKVSEALGYSTVADQRQSAQIFLRMVANKLGLEPYVEEAASIL
HRYGEHTHVAATAALYVAAAPSCSLTEVTKASGFSVVAICRRAKAIREKLWIQVKNSERG
FGATSPALQPQAQQASRPASQQERV
NT seq 618 nt   +upstreamnt  +downstreamnt
atgagactcgacgagctgctgacgagctacgccaacgctttctcgttgcccaaccacgtg
gtagacttggctagggagatgctggaaaggctcaggagaatgggcttgtcacagggaagg
aatggcgagactttggttgccgcggttctctacatcgcctgcaaacagagccagcatcct
gttcagctaaaggatatgctccagcgaaagaaaggcttcctgaaaacgttgaggaaggtg
tcggaagcccttggatacagcaccgtggctgaccagcggcagtcggcgcaaattttccta
agaatggtagccaacaagcttggtctagagccctacgtggaagaggccgcgagcatcctt
catagatacggagaacacacacatgtcgccgcaaccgcagcgctatatgttgcagccgcg
ccaagctgctccttgaccgaggtgaccaaggcctccggtttctcagttgtcgctatatgt
cgaagagccaaagcaataagggagaagctctggatacaagtaaaaaatagtgagaggggg
tttggtgctacatcgccggcgcttcagccgcaggctcagcaggcttctcggccggcttct
cagcaggagcgggtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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