KEGG   Cucumis sativus (cucumber): 101203156
Entry
101203156         CDS       T02486                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101203156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101203156
   03041 Spliceosome [BR:csv03041]
    101203156
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101203156
Spliceosome [BR:csv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101203156
SSDB
Motif
Pfam: WD40 NBCH_WD40 Ge1_WD40
Other DBs
NCBI-GeneID: 101203156
NCBI-ProteinID: XP_004144008
UniProt: A0A0A0LWJ2
Position
1:complement(25854195..25862559)
AA seq 369 aa
MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
CISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
DCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
KDKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDN
QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH
LCTFCCQYR
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgttgggggacgcaacgaattgggacgaagctgcctacagagagagtatatataaagaa
agagagattcaaactcgtactgtgttcagaactgcatgggcgccttctttaaatggctgc
cctgagaccattgtggctgcatccagtgatggatccgttgcctcttactctatcgcttct
tgcatctctaagctccaatttggttatggaaatactaaaagtttgttagcagcagagcct
aattgcttccttcaagggcacgatgggcccacgtatgatgtcaaattttacgataatggt
gacaatactctattactgagctgtggggatgatggtcacattcgaggatggaggtggaga
gattgtacagatataaaagtgcccatttctttgcaaggtagtcatattgagcctgtaatg
gacctgatcaatcctcaattcaaaggtccttggggtgctctttctccaatccctgaaaat
aatgcaattgctactgatgcccagagtggatccattttctctgctgctggagattcttgt
gcgtattgttgggatttggagagcggtaaagttaagatggtgtttaaggggcactctgac
tacttgcactgtattgttgcgcgaaacactgtcaatcaaatcataactggttcagaagat
ggtacagcacgaatatgggattgcaagagtggaaagtgcattcaactaattgaccctgct
aaggataagaagttgaaagggcatttctcatttgttagatgcattgctcttgatgcaagt
gaaagctggttggcctgtgctgatggtcggagtatatctgtttggaaccttccgtcttct
gaattcatttcaaaaactttgacccgttcttcattgcaggatatggttttttgtgataat
caaatattaggtgttggagcagagccatttctaactcgattcgacataaatggatccgtg
ctttcacaaatacaatgcgcccctcagtcagctttttctgtcgcattgcatccatctggc
gtcgcagcagttggagggtacggtggtctcgtcgatgttatctcgcagtttggaagtcac
ttatgcacattctgctgtcaatacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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