KEGG   Cucumis sativus (cucumber): 101208984
Entry
101208984         CDS       T02486                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03030  DNA replication
csv03410  Base excision repair
csv03420  Nucleotide excision repair
csv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101208984
   03410 Base excision repair
    101208984
   03420 Nucleotide excision repair
    101208984
   03430 Mismatch repair
    101208984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    101208984
   03036 Chromosome and associated proteins [BR:csv03036]
    101208984
   03400 DNA repair and recombination proteins [BR:csv03400]
    101208984
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101208984
  DNA Replication Termination Factors
   ELG1-RFC complex
    101208984
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101208984
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101208984
  Check point factors
   HRAD17(Rad24)-RFC complex
    101208984
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 Mg_chelatase AAA_16 Viral_helicase1 RuvB_N AAA_11 nSTAND3 AAA_24 AAA_19 AAA_5 AAA_assoc_2 AAA_30 AAA_28 bpMoxR RNA_helicase AAA_25 AAA_18 MeaB NTPase_1 IstB_IS21 AAA_3 T2SSE SLFN-g3_helicase KTI12 ABC_tran AAA_7 DNA_pol3_gamma3 DO-GTPase1
Other DBs
NCBI-GeneID: 101208984
NCBI-ProteinID: XP_004147970
UniProt: A0A0A0L763
Position
3:complement(2912344..2917616)
AA seq 331 aa
MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV
KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgtcttcttcaggcagcagtagcaactacgacattccatgggtggagaagtacagg
cccaacaaggtcaccgacattgtgggtaatgaagatgcagtttctcgtctccaagtcatt
gctcgggacggcaacatgcccaatctcatattatctggtccgccaggaactgggaagaca
accagtattttggctcttgctcatgagctcttgggaccaaattacaaggagggtgttctg
gagcttaatgcatcagatgataggggaatagatgtcgtgaggaacaaaatcaagatgttt
gctcaaaagaaagtaacattgcctcctggtcgacacaaagtggtaatattggatgaagct
gacagcatgacaactggagcacaacaagctttgaggcgtacaatggaaatttattcaaac
acaacacgttttgcccttgcatgtaatacctcctcaaaaattattgagcctattcagagt
agatgtgcaattgtccgattttcaagattaacagatcaagagattcttgggcgccttatg
gtggtgattcaggcagaaaaggtaccctatgttccagaaggtcttgaagcaatcattttc
actgctgatggtgatatgaggcaggcgctgaataatttgcaagctacacatagtggattc
cgctttgtaaaccaggacaatgttttcaaggtttgcgatcaaccacatccgctgcatgtg
aagaatgtggtacgcaatgtgcttgaaggtaaatttgatgatgcttgtacaggcctgagg
caactctacgacttaggctattcccccactgacataataaccactcttttccgaatcatt
aagaactacgatatggccgaatatctgaaactggaattcatgaaggaaactgggtttgcc
catatgagaatctgtgatggtgtcggttcttaccttcaactatgtggtcttttggccaag
ctttccatggttcgtgagactgcaaaagcaccatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (33)   
   Pfam (33)   
All databases (61)   

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