KEGG   Cucumis sativus (cucumber): 101215377
Entry
101215377         CDS       T02486                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101215377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101215377
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     101215377
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII SAWADEE
Other DBs
NCBI-GeneID: 101215377
NCBI-ProteinID: XP_011655018
UniProt: A0A0A0KM17
Position
5:complement(6559064..6566701)
AA seq 1264 aa
MVKTKRRVYEFKHPFNDYPFEAMCCGSWQAVEKIRIRNGLITLHLVNDQFMVLERGPYSD
FRVRSRQATSSDCTCFLRPGVDVCVLSFSNNMENLDMQSPQPVWIDAKISSIKRRPHQAG
CSCQFYVQLYADSKPLGSEKGSLCKEIVEMGIDQISILQRVRKNICEGQFYRWDCSEDSS
LLPKTKLLLGKFLSDLSWLIVTSALKHVTFDVISLDNKILYQVLEINQKSTSVTSDKILH
TVNFRDDDGRLIPIIHQLDTSDNIEILPGEDAFDNQLRSITDPVDLRRSKRRNVQPVRFL
GCDSIDESEIDYSGTRIYKNDQLNDDDEMILPLAYLFGTPVGSSKQKIENESNHDSNKLS
VHDDLSVFKSRIKSLEMKSGMSDELEDKNQLAIVPILDEQPIASDPYPNVANSCGNYTKQ
ITEMSSTYYYINNKSKIRKRKFSDFQDVDFENDIDSCRGKASSSKGRRPSYHSISYKENG
HPKERPWQKRSLSAGAYKDLINSFLKNIDSTIKKDEPQIIDQWKEFKNKSCLDKKIEMEM
PSNEKEEESSEIEMLWREMEISLASSYLIDANQGFSNGTSMEPEQKPSKWCKHEFKLNEE
IGMLCHICGFVSTEIKDVSAPFMQHMGWSTEERRTEEKDPEHNSDEEEEMNIFSGLPSSD
DTLSEENDNVWALIPEFRNKLHLHQKKAFEFLWKNVAGSMVPALMDQATRKIGGCVISHT
PGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEVPVPIHLIHGRRTYR
VFRANSKPVTFAGPRPTDDVMHILDCLEKIKKWHAHPSVLVMGYTSFLTLMREDAKFAHR
KYMAKVLRQSPGILILDEGHNPRSTKSRLRKVLMKVETDLRILLSGTLFQNNFCEYFNTL
CLARPKFVNEVLKKLDPKFQRKKKKAPHLQEARARKFFLDKIARKIDAGDEEDRRDGLNM
LRNMTGGFIDVYEGGSKDGLPGLQIYTLLMNTTDIQQEILNKLHKIMAQFPGYPLELELL
ITLGSIHPWLVKTAVCANKFFTDREMMELDKYKFDLRKGSKVMFVLNLVYRVVKKEKILI
FCHNIAPVRLFVELFENVFRWKRGREILALTGDLELFERGKVMDKFEDPVGPSKVLLASI
TACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQLKVVYVYQLLVTGTLEEDKYK
RTTWKEWVSSMIFSEAFVEDPSKWQAEKIEDEVLREMVEEDRVKSFHMIMKNEKASTVIR
ELKD
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggttaaaactaaaaggcgtgtatatgaattcaagcatccgttcaatgattatccattc
gaggcaatgtgctgcgggtcttggcaagctgtggagaaaataagaattcgtaatggttta
ataaccctccatttagtgaatgatcagtttatggttttggaaagaggcccctactcggat
tttcgggttcggtcgagacaggcaacctcatccgactgcacctgttttctacgacctggt
gttgatgtttgtgttctctctttctctaacaacatggagaatttggacatgcaaagtcca
cagcctgtgtggattgatgctaaaataagctcaattaaacggaggcctcatcaagctggg
tgttcatgccagttttacgtccaattgtatgctgattcaaaaccccttggttcagagaaa
ggatcactctgtaaagaaattgtagaaatgggaatcgatcagatatccatactccaaagg
gttagaaagaacatctgtgaaggtcaattctaccgatgggattgctccgaggactcctct
ttgttgccaaaaaccaaactacttttgggaaaatttctttccgacctttcgtggttaata
gttacatcggcattgaaacatgtcacctttgatgtgatatcattggataacaagatcttg
tatcaagttttagagattaaccaaaagagcacatcagtaacttctgacaagattttacat
actgtaaactttagagatgatgatggtaggcttattccaataatacatcagctagatacc
tctgataacattgagatacttcctggagaggatgcatttgacaatcaacttcgttccatt
actgatcctgtggacttaaggcgttcaaaacggcgtaatgttcaacctgttcgttttctt
ggctgtgatagtattgacgaatcagaaattgactacagtggaaccaggatatataaaaat
gaccaattgaatgatgatgatgagatgatattaccactcgcttacctgtttgggacgcct
gtaggctcttcaaaacagaagattgaaaatgaaagcaaccacgattccaataaattgagt
gtacacgatgacctctctgttttcaagagcagaataaagtctttggaaatgaaatcagga
atgagtgacgaattagaagataaaaatcaacttgccatagttcctatacttgatgaacag
ccaatagcatctgatccatatcctaatgttgccaacagttgcggtaattatacaaaacag
ataactgaaatgtcatccacgtattattacattaataacaaaagcaaaatccgaaaaaga
aagttttcggactttcaagatgtggactttgagaatgatattgatagctgtagaggaaaa
gcttcgagtagtaaaggtaggaggcccagttatcattccataagttataaagagaatggt
catcctaaagaaagaccatggcagaaaaggtccttaagtgcaggtgcatacaaggatttg
attaattccttcttgaagaatattgattcaacaattaaaaaagacgagccgcaaataatt
gatcaatggaaagaatttaagaacaaaagctgcttggataaaaagatcgagatggaaatg
ccctctaatgagaaagaggaagaaagctctgagattgaaatgttgtggagagaaatggaa
atatcccttgcctctagttaccttattgatgccaatcagggctttagtaatggaacatca
atggagcctgaacagaaaccaagcaaatggtgcaagcatgagttcaaattgaatgaagag
attgggatgctctgccatatatgtggttttgtgagcactgaaattaaagatgtatcagca
ccatttatgcaacacatgggctggagtacagaagagcggcggactgaagaaaaagatcca
gagcacaatagcgacgaagaggaggagatgaatattttctctggccttccttcttctgat
gatactttatcagaagaaaatgataatgtctgggccttgatccctgaattcagaaataaa
ttacatctccaccagaaaaaagcattcgagttcctgtggaaaaatgttgctggttctatg
gttccagctctcatggatcaagcaactcgtaaaataggtggttgtgtgatatcccataca
ccgggagctggaaaaacctttcttatcatctcgttccttgttagttacttgaaacttttc
ccagggaaaaggccccttgtccttgctccaaagacaactctatatacgtggtacaaggag
ttcattaagtgggaggttcctgtgccaattcatctaatacatggtcgtagaacctaccga
gttttccgggcaaactcaaaaccagtgacctttgcaggtccaaggcctacagatgatgtc
atgcacatcttggattgcctggaaaagataaagaagtggcatgcacatccaagtgttctt
gttatgggctatacatcattccttacattaatgagggaagatgcaaagttcgcacacaga
aagtacatggccaaagttctgcgccaaagtccaggtatcttgatattggatgaggggcat
aaccccaggagtaccaagtccaggctgaggaaagttttgatgaaagttgaaacggacctt
agaatactcctctcagggacattgtttcaaaataatttctgtgaatatttcaataccctt
tgcttggcaagacccaagtttgtgaatgaagtgttgaagaaactagatcccaaattccag
aggaagaaaaaaaaagctccacatttgcaagaagctcgggcaaggaaattctttctagat
aagatagctcgaaaaatcgatgcaggtgatgaagaagacaggagagatggtctgaatatg
ttaagaaatatgacaggtgggtttattgatgtttatgaaggtggcagtaaggatggtctt
cctggtttacaaatttacaccttactaatgaacacaactgacattcaacaagaaattttg
aataaacttcacaagataatggctcaattccctggatacccccttgagttagaactcctc
ataacgcttggttcgatacatccttggttagtaaaaactgcagtgtgtgccaacaaattt
ttcactgatagagaaatgatggagctagataaatataaatttgatttgaggaaaggatca
aaagtgatgtttgttctgaatcttgtgtatcgtgtcgtcaagaaggaaaaaattctgatc
ttctgccacaacattgcacccgtcagactatttgtcgagctgtttgagaatgtgtttagg
tggaagagaggccgtgaaatcttggccctcacaggagacctcgagctgtttgaacgagga
aaagtgatggataagtttgaagatccagtggggccatccaaagttcttcttgcttcaatc
actgcttgtgcagaaggcataagtttgacagcagcttcacgagtcatcctactagactcg
gagtggaatccttcgaagacaaagcaggccatcgctcgagcttttcgtcctggccagctt
aaagtggtttatgtctatcaactactagtaactggcacactggaagaagacaagtacaag
agaactacatggaaggaatgggtgtcgagtatgattttcagcgaggcatttgtggaggat
ccttctaaatggcaagcagagaagattgaagatgaagttttgagagagatggtggaggaa
gatagagtgaaatcatttcatatgattatgaaaaacgagaaggcttctactgtgatcagg
gaattaaaggattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (55)   

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