KEGG   Cucumis sativus (cucumber): 101215523
Entry
101215523         CDS       T02486                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101215523
   03041 Spliceosome [BR:csv03041]
    101215523
   03036 Chromosome and associated proteins [BR:csv03036]
    101215523
Enzymes [BR:csv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101215523
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101215523
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101215523
Spliceosome [BR:csv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101215523
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    101215523
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 101215523
NCBI-ProteinID: XP_004142160
UniProt: A0A0A0L1R4
Position
4:13642385..13648584
AA seq 627 aa
MRTSWADLAASSAAENVAAGSANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANSGP
AVGNDRSGHAGSRWGGGPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREVNPFGDE
EDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKP
TPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLAL
ILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVDL
LERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQ
RLASDFLDKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSLT
LVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAARG
LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARSLADLMSESN
QEVPEWLIRFAARSAYTGGRNRRSGGGRFGSRDYRRESSFNRGGSDYYGGGNNNSGGGYG
GGSGGYGGGGGGGGGGYSGSGVTSAWD
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgcgaacttcgtgggcagatttggctgcaagctcggctgctgagaatgtagctgctggt
tctgctaacaattgtagtgctggaactactacagcacctggccgatcggcttatgtacca
ccacatctgcggaatcgcacagccccggctgatctgcctgctgcagcaaatagtgggcct
gctgtgggaaatgatcgttctggacatgcagggtctcgctggggtggtggcccccggaat
gattataataatcgttccggttatagtggtggtagtcgaggaggaggatgggggggaagt
agaggaggtggatgggatcgtgggaggggggatcgggaagtgaatccatttggagatgag
gaggatacagaggaagcatttggagagcaagaaaatactggtataaattttgatgcttat
gaagatattcctgtggaaacaagtggtgaaaatgtaccccctccggtgaatacatttgct
gaaattgatttgggtgaagcacttaatcaaaacattcgacggtgtaagtatgtaaaacca
actcccgtccagcggcatgctattcctatctctcttgcagggagagacttgatggcttgt
gctcagactggatctggaaagactgctgctttctgtttccccattatcagtggcataatg
aagggccagagtatgccgagaccagctcgaggtgcacgcacagtgtacccacttgctctt
attctctccccaaccagggagctttcaatgcaaatacatgaagaagcaaggaaattctct
tatcaaacgggggtcagagtggtggttgcttatggaggtgcaccaatcaacctacagcta
cgtgatctagaaagaggtgttgatattcttgttgcaactccaggaagattagtagatttg
cttgaaagggctaaagtttcactgcagatgataagatacttggcccttgatgaagcagac
cgcatgttagatatgggatttgagccccaaattaggaaaatagtagaacaaatggacatg
cctccacctggggtaaggcagactatgctgttcagtgcgacttttccaagggagattcag
agacttgcctcggattttctagataagtatatatttctggctgttggaagagtgggctcg
agcactgatctaattgctcaaagagttgagtttgttcatgaagctgacaagagaagtcat
ttattggaccttcttcacgcacagagggcaaatggtgtgcagggcaagcaatctcttact
ctggtttttgtggagacaaagaagggagctgatgctcttgaacattggttatgcctcaat
ggttttcctgccactaccattcatggtgatagaacacaacaggaaagagaacaagcattg
aggtcatttagaagtggcaacactccgattttagtggcaactgatgtagctgctcgtggg
cttgacattcctcatgttgcacatgtggtgaacttcgatctccctaatgacattgatgat
tatgttcatagaattggacgaacggggagagctgggaaaactggtttagcaactgccttt
tttaacgagaacaatgcatccttggcaaggtccttggctgatctgatgtcagaatcaaat
caggaagttcctgaatggctaatacgatttgctgccaggtccgcctacactggaggaaga
aaccgtcgatctgggggaggccgatttggtagccgtgactatagaagagaaagctctttc
aacaggggtggttctgattattatggtggaggcaacaacaatagtgggggtggttatggt
ggtggttctggtggatatggaggaggaggaggaggaggaggaggaggatacagtggttca
ggggtgactagtgcatgggactaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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