KEGG   Cucumis sativus (cucumber): 101217129
Entry
101217129         CDS       T02486                                 
Name
(RefSeq) plant-specific TFIIB-related protein 1
  KO
K03124  transcription initiation factor TFIIB
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101217129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101217129
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     101217129
 Prokaryotic type
  Archaeal type
    TFB
     101217129
SSDB
Motif
Pfam: TFIIB Cyclin_C TF_Zn_Ribbon HTH_Mga DUF2387
Other DBs
NCBI-GeneID: 101217129
NCBI-ProteinID: XP_004143581
UniProt: A0A0A0KM51
Position
6:27305259..27309614
AA seq 443 aa
MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN
LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKIDAFEGASLEKDK
PIETKPNISTEISEMSHPSRVKEDSESKFVSHGMYNPVTNKSSTFSQPHPPKGNSVAGFV
GKKSQTADTQGMDIVKDHSNSQQ
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaagtgcccctactgctcggcggcacaggggcggtgcgtcacctccagcaccggcaag
tccatcacagaatgcatttcctgcggccgcgttgtcgaagagcgacaattccagccccat
cacctcttccaccttcgcgctcaagataatcccctttgtctcgtcacctccgacctcccc
acccctcccgtccaccaccagaacgatcaggttttggatcctttcgagcccaccggcttc
attacagccttctccacttggtccttggagcacaatccactcttcttccgctcctgcttc
tccttctccggccaccttgcggagctcgagcgtaccctagagtctacctcgtcatccaat
ttgccgtcctcgtctacggtcgtggtcgataaccttagggcttatatgcagattatcgat
gtagcttctcttttggggttggattactatatttccgagcacgcgtttaagttgtttaga
gattgttgttcggctacttgtttaaggaaccgaagcgttgaggcgcttgccactgctgcc
cttgtccaggctattagagaggcccaggagccccgaacccttcaggaaatctccattgca
gcgaatgtaccgcaaaaagagatagggaagtacatcaagattttgggagaagctttgcaa
ttaagtcaacccatcaacagcaattccatatcagttcatatgccaaggttctgcacgctt
ctccaactcaataaatctgcacaggaactggcaactcacataggggaagttgtcatcaac
aaatgcttctgcactcgcaggaatcccattagcatctcagctgctgcaatatacttagct
tgccaattagaagacaagcgtaagacgcaagcagaaatttgtaaggttacaggtctcact
gaagtcaccctccggaaagtttacaaggagctactagaaaattgggatgatttgcttccg
tctaattatactcctgctgttcctccagaaagggcatttcccacaactgtaattgcttca
ggccgttctgcagctcctaaaattgatgcatttgaaggggcttctttagagaaagacaag
ccaatagagactaaacctaatatatccaccgagatctcagaaatgagtcatccatccaga
gtcaaggaagatagtgagagtaaatttgtatcccatgggatgtacaaccctgtaactaac
aaatcgtcaactttctctcaaccacaccctcctaaagggaattctgttgcaggttttgtt
gggaagaagagtcaaactgctgatacccagggaatggatattgttaaggatcactccaac
agccaacagtaa

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