KEGG   Cucumis sativus (cucumber): 101220903
Entry
101220903         CDS       T02486                                 
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101220903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csv03009]
    101220903
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    101220903
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 SRPRB EFG_IV
Other DBs
NCBI-GeneID: 101220903
NCBI-ProteinID: XP_004139776
Position
7:complement(10347412..10351113)
AA seq 1035 aa
MDDLETRRIRNICILAHVDHGKTTLADHLIAASGGGLIHPKMAGRLRFMDYLDEEQRRAI
TMKSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLAPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSGYKSEKYLSDVDSI
LAGSSGEVNDENLEFIEDDEEDTFQPQKGNVVFVCALDGWGFGINEFAEFYASKLGANVS
ALKKALWGPRYFNPKTKMIVGKKAMAGGSKARPMFVQFVLERLWEVYGAALETDGNKEVL
QKVNSTFNLTIPARELSNKDPKVVLQAIMSRWLPLSDAILSMVVNCMPDPIAAQSFRISR
LIPKRDIIDTGVDTNVLTEADLVKRSIEACDSRPEAPFVAFVSKMFAVPSKILPRSHGET
TSVFTDDGGDGESDECFLAFARVFSGFLFSGQRVFVLSALYDPTKGESMHKHIQEAELHS
IYLMMGQGLKPVTSVKAGNLVAIRGLSHHILKTATLSSTRNCWPFSSMAFQVAPTLRVAL
EPSDPGDIGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFARVS
LEVSPPLVSYKETIEGEASSVLDYFKVLSESTDCVTKKTPNGRCIVRVQVLKLPPALAKV
LDENSDVLGDIVGVKLGQNYKNLETKRSSLMENENPTEVVKKLIADAACTDLSSKDDHEG
SRVDKHNALWSKLLKRIWALGPQQIGPNILISPDPKVKDPDGSVLIRGSPHVSQRLGFVD
DSLNGNLDPKTSLEGDMSSAASPEGTQTQCMEAASLENSVLSGFQLATSAGPLCDEPMWG
LAFIVDVSISSLSGNSDESESPFQPDNNAIFSGQVMTTVKDACRAAVLQKKPRLVEAMYF
CELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSG
AASALLVLSHWEELCEDPFFIPKTEEELEEFGDGSSVLPNTARKLIDTVRRRKGLPVEEK
VVQHATKQRTLARKV
NT seq 3108 nt   +upstreamnt  +downstreamnt
atggatgatctcgaaactcgaagaattagaaacatatgtatattagctcacgtcgaccat
ggcaagacgacacttgccgaccatcttatagccgcctcggggggcggtttgatccaccca
aagatggcgggtcgcctccgtttcatggattatcttgatgaggaacaaaggcgggcgatt
accatgaagagctcttcgattggtttacggtacaaggaatactctattaacctcattgat
tcgcccggccatatggatttttgtagtgaagtgtccactgctgctagattgagtgatggg
gcattggttttagttgatgctgtggagggtgtgcacattcaaactcatgctgttttgcga
caggcttggattgagaagcttgcgccgtgtttggttcttaataagattgataggttgata
tgtgagttgaagttgagtcctatggaagcgtatactcgtttgttgaggattgttcatgaa
gttaatgggataatgagtggatataagtccgagaagtatttgtccgatgtggattcaata
cttgcaggttcttcaggtgaggtaaatgatgagaatctcgagtttattgaggacgatgag
gaagatacatttcaaccacagaaagggaatgtggtttttgtatgtgctttagatgggtgg
ggttttggcattaatgagtttgctgagttttatgcttcaaagcttggggccaatgtatct
gcattgaagaaggccttgtggggtccacggtattttaatccgaaaaccaagatgatcgtt
ggaaagaaggccatggctggaggaagtaaagctcggcctatgtttgttcaatttgtgctt
gagagactttgggaagtttatggggctgctctagaaactgatgggaataaggaggtactt
cagaaggttaacagtacatttaatttgactataccagctcgagaactttctaacaaggat
ccaaaggtggttcttcaagctattatgagtcgttggcttcctctttcagatgcaatattg
tcaatggttgtgaactgtatgcctgacccaattgctgcacaatcatttcgaatatcacgg
ttgattccgaagagggatataattgataccggtgttgataccaatgtattaactgaagca
gatcttgtcaagagatcaattgaagcttgtgattcgaggcctgaagctccatttgttgct
tttgtgtccaagatgtttgcagttccatctaaaattcttccacggagtcatggtgagact
actagtgttttcactgatgatggtggagatggtgaatcagatgagtgctttcttgcattt
gcaagggtatttagtgggtttcttttttctggacagagagtttttgttctttcagcttta
tatgacccaacgaaaggggaatcaatgcacaagcacattcaggaggctgaattgcattcg
atttatctaatgatgggccaaggcttgaaaccagtgacctcagtaaaagcaggaaacctt
gtagcaattcgtggtcttagccatcatatattgaaaactgcaactctttcatcgacaaga
aattgctggcctttctcaagtatggcattccaggttgctcctactcttagagtggcactt
gagccatctgatcctggagatataggtgcattgttgaaaggcttaaggcttttaaatcga
gcagacccttttgtagaggtaactgtttctgcaaggggagaacatgtacttgctgcagca
ggagaagttcatctcgagagatgcataaaggatttgaaggataggtttgccagggtaagc
ttggaagtctctccacctctcgtatcatataaagaaacgattgaaggagaggcatctagt
gtgttggattattttaaggtgttgtctgaaagcacagactgtgttactaagaaaacccca
aatggtagatgtattgtcagagtgcaggtattgaaacttccacctgctcttgctaaagta
cttgatgaaaattctgacgtattgggagatattgttggagtcaagttggggcagaactat
aaaaacttggaaacaaagagatcaagtctgatggaaaatgagaatccaacggaagtagta
aaaaaactaatagcagatgcagcatgtactgatctatcttcaaaggatgaccatgaaggc
agtcgggttgacaaacacaatgcactgtggtcaaagcttctcaagcgaatttgggcactt
ggaccacagcagattggtcctaacattctaattagcccagatcccaaagtaaaggatcct
gatggctctgttcttattcggggttcacctcatgtgtcacagagattgggttttgtggac
gattctttaaatggtaatttggatcctaaaacatctttggaaggtgatatgtcttctgca
gcatcaccggaaggaactcagacgcaatgtatggaagcagcatctctcgagaacagtgtt
ctatctggatttcagcttgctacatcagctgggccattatgtgatgaacctatgtggggg
ttggcatttattgttgatgtctctatttcttcattgtctgggaattcagatgaatctgaa
tctccctttcaaccagacaacaatgctatcttttctggtcaagttatgacaactgtaaag
gatgcctgtagagcagctgtgcttcaaaagaaaccacggcttgttgaagccatgtacttc
tgtgaattgaatactcccactgagtatttgggtccaatgtatgctgtactcgcacgaagg
cgagcccgggttttgaaagaagaaatgcaggaaggttcacctctgtttactgtgcatgca
tacgtgcctgtgtcagaaagctttggttttgcagatgaattaaggagatggacttctgga
gcagcgagtgctcttttagtgcttagccattgggaagaactatgtgaagatccttttttt
atccccaaaacggaagaagaactagaagagtttggagatggttctagcgtgcttcccaac
acagcaagaaagctcattgatactgtaagacggcgtaagggtcttccagtggaagaaaaa
gttgtacaacatgcaacaaagcagagaactttggctcggaaagtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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