KEGG   Cenarchaeum symbiosum: CENSYa_0465
Entry
CENSYa_0465       CDS       T01380                                 
Name
(GenBank) superfamily I helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
csy  Cenarchaeum symbiosum
Pathway
csy03420  Nucleotide excision repair
csy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CENSYa_0465
   03430 Mismatch repair
    CENSYa_0465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csy03400]
    CENSYa_0465
Enzymes [BR:csy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CENSYa_0465
DNA repair and recombination proteins [BR:csy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CENSYa_0465
   MMR (mismatch excision repair)
    Other MMR factors
     CENSYa_0465
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 Viral_helicase1 Cas_Cas4 AAA_12 AAA_11 Dna2 AAA_30 DEAD
Other DBs
NCBI-ProteinID: ABK77099
UniProt: A0RUT2
Position
complement(388656..391589)
AA seq 977 aa
MDLDPEQRRAVEYSGPALLVRAGPGSGKTRVIVERVLHMVRNGADPGRILCLTFSEKAAG
EMLGRLKESIDTTEMDVCTFHSFAKQILEDNEPESGIVTSRGTISGPAGAAWAAAHIDEF
KLGSHRVVIRPHEVIRKIMEGISGFKRELVTPGELEKYLEGEENGELKDLCSVYQRYQGH
LREMGIIDFDDMVSEAVRLFRARDDVRSEYGGRYSHILVDELQDANYAQLELVRLIAGNI
TAVGDENQSIYGFQGAYTSGFENFDDITGGAETISLNNNYRCTKTIAGLAAQCIANTPSG
SQAGAVHPEGSPVEIVECADEDSEAACIADRIVQIRSPGGESAGYSIAVLTRKIADGKKF
SDELELRGVPARYSGGDGIFSAGPARELLTYLEIARAPASAGGEINLLMKKHGIPEGDIA
VINTEAKKAAYNDIHGNDHVLEVIRRGGNSGVRKKAELAGLVRRLDKVITLAGSYSPGTL
AYHIAVPLAGLFRNLEDGAGAEHLREACRLATEYDLLDPRGGLDGLVGYLWAANSDKNLR
SDADAGGAVEVTTIHKSKGREFDAVFIADAVEDRLPLKYKGRKYQVPTTLLHGRRPQGKE
KDRHMQEERRLLYVAMTRAKKNLCITYSKEYASKKTESKPSRFLEEMQFRSNPLVRTFVF
AGGPAQGAGTASTVSGLQEEAMRAVSVGDHGTAVQKVTDLAALEYMKEHGGLDGFVPPAA
RSPSPGLGAGAGPAKPAPLRLSSTKIGTYKKCPLMYWFAHVMTIPSPPGIPMVMGGVIHK
VLEKITDAQMNGQTPDEAGALAMLEGQLKYAVYDSRTSFEQSKEEAESMISWFVKWSAGS
PNKPIAVEKKFELEIAGAEFRGSIDRVERTPDGGLVLIDYKTGRTKVSPGKIAEDVQLNL
YAEAAKKLYKELPEKAVLLYLESGETVEYRLDEASVKSAIGRIEEYVDGIREGRFDPTPA
VSTCMFCDYSGMCDYAV
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggatcttgacccggagcagaggagggccgtcgaatacagcggtcccgcactgctggtc
agggcgggcccgggcagcggcaagaccagggtgattgtagagagggtgctgcacatggtg
agaaacggcgcggatcccggcaggattctgtgccttacattctctgagaaggcggcaggc
gagatgctcggccgcctcaaggagagcatagacactacagagatggatgtgtgcaccttt
cattcctttgcaaaacagatcctcgaggacaacgagccagaatcaggcatagtcacgtcc
cgcggcacaatatctgggcccgcgggggcggcgtgggccgcagcccacatagacgagttc
aagctgggcagccaccgcgtggtgatcagaccgcacgaggtgatcagaaagataatggag
gggatcagcggcttcaagcgggagcttgtaacacccggagagcttgaaaagtatctcgag
ggggaggagaacggcgagctaaaggacctctgctccgtgtaccaaagataccaggggcac
ctcagggagatgggaataatagactttgacgacatggtatcggaggcggtccggctattc
agggcgagggacgatgtgagatcagaatacgggggcagatactcccacatactagttgac
gagctccaggatgccaactatgcccagctggagcttgtcaggctgattgcgggcaacatt
acagccgtgggggatgagaaccagtcgatttacggttttcaaggggcatatacgtcgggt
ttcgaaaactttgacgatatcacaggtggcgccgagaccatcagtctgaataacaactac
cgctgcacaaaaaccatagcggggcttgcggcccagtgcattgcaaacaccccgtccggc
agccaggcaggtgcggtacacccggagggatcccctgtggagatagtcgaatgcgcagat
gaggactctgaggcggcgtgcatagccgacaggatagtgcaaatacggagccccggaggc
gagtctgccggttacagcatagcggtgctcacaagaaaaattgccgacgggaaaaagttt
tccgacgagctcgaactgcgcggcgtgcccgcaagatactccgggggggacggcatcttc
tcggcgggccccgcacgcgagctgcttacatacctcgagatagcccgcgccccggcctcc
gcaggaggggagataaacctcctgatgaaaaaacacggaatacccgagggggacattgca
gtcataaacacggaggccaaaaaggccgcgtacaacgatattcatggcaacgaccatgtg
ctcgaggtgatccgccgaggggggaactcgggggtgcgcaaaaaagccgagcttgcagga
ctggtccggaggttagacaaggtaatcacccttgccgggtcctattcccccgggacgctt
gcataccacatagcggtgccccttgcggggttgttccggaacctagaggacggcgccggg
gcggagcatctgcgcgaggcctgcaggctggccacagagtatgacttgctcgacccacgc
ggcggcctcgacggcctggtgggatacctctgggcggcaaactcggacaagaacctgcgt
tctgacgcggatgcgggtggcgccgtagaggtaactaccatacacaagagcaagggcagg
gagtttgacgcggtctttattgcagatgcggtagaggacaggctgcccctcaagtacaag
gggagaaaataccaggtccccacgacactgttgcatgggaggaggcctcagggaaaagaa
aaggaccggcacatgcaagaagaaaggaggctgctctacgtggcaatgacacgcgctaaa
aaaaacctgtgcataacatactcgaaagaatacgcttcaaagaagaccgagtcaaaaccc
tcccgcttcctagaggagatgcagttccgttcaaacccgctcgtcaggacttttgtgttt
gccggcgggcccgcccagggggccggtactgccagtacggtctccggactgcaggaggag
gccatgcgcgccgtatcagtgggggatcacggaacggcggtgcaaaaggtgacggacctg
gccgcgcttgaatacatgaaggagcacggaggcctcgacggctttgtcccgcccgcggca
aggagcccgagccccggactcggggccggcgccgggcctgcaaagccggctcctctgagg
ctgagcagtacaaaaatcgggacatacaaaaaatgccccctgatgtactggtttgcccac
gtgatgacgatcccgtccccgccgggcatcccaatggtcatgggcggcgtcatccacaag
gtcctagagaagatcaccgatgcccagatgaatggccagactcccgacgaggcaggtgcc
cttgccatgctggaggggcagctaaagtatgccgtctatgatagccggacctcttttgag
cagtcaaaagaggaggcagaaagtatgatcagctggtttgtaaaatggagtgcaggcagc
cccaacaagcccatagcagttgaaaaaaagttcgagctggaaatagcgggcgccgagttt
agaggaagcatagacagggttgagagaaccccggacggagggctcgtcctgatagactac
aagaccggcaggaccaaggtctcccccggcaaaatagcagaggatgtacagctcaacctg
tatgccgaggccgccaagaagttatacaaagagctgcccgaaaaggcagtactgctctac
cttgagagcggtgagacagtcgagtaccggctcgacgaggcaagtgtgaagagtgccatc
ggacggatagaagaatacgtagacggcatacgggagggcagattcgaccccacacccgcg
gtcagcacatgcatgttctgtgactattccggcatgtgcgattatgccgtctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (84)   

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