KEGG   Clostridium tetani E88: CTC_02103
Entry
CTC_02103         CDS       T00112                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ctc  Clostridium tetani E88
Pathway
ctc03030  DNA replication
ctc03410  Base excision repair
ctc03420  Nucleotide excision repair
ctc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTC_02103
   03410 Base excision repair
    CTC_02103
   03420 Nucleotide excision repair
    CTC_02103
   03440 Homologous recombination
    CTC_02103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctc03032]
    CTC_02103
   03400 DNA repair and recombination proteins [BR:ctc03400]
    CTC_02103
Enzymes [BR:ctc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CTC_02103
DNA replication proteins [BR:ctc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CTC_02103
DNA repair and recombination proteins [BR:ctc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CTC_02103
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CTC_02103
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AAO36601
UniProt: Q892J4
Position
complement(2237704..2240352)
AA seq 882 aa
MIGEILMPKRDKLVILDGNSLMNRAFYALPPLTNHEGVHTNAVYGFTNMLLKIKDDIKPD
YIVCTFDKSAPTFRHQAYKDYKAGRKKMPEELREQFPIVKGLLSKLAIEIFEIEGFEADD
LIGTLSKFAEEKDIEVYIVTGDKDALQLASDTTKILFTKRGITEREIYDRQKVVDEMGVT
PTEFIDVKGLMGDPSDNIPGVPGIGEKTALKLIKEYSSVENVLNNIENLSGKKLKENLIE
NSEQAIFSKKLATIMRNVPIDIDLEKIKSKEEYDIEAVREIFIKLQFKSLIDKIPKGENH
KEVEEEEELVYEEIHTIEDLIKLCTEIGNKDEKIYVNFKSTDTSLYSKISLEKLYILFKN
KCYVVNIEERIEENKDKTIEILKTIFEKEAVRVVSHDVKVLSMALKKLDVEFTKALFDLK
IAAYLIDSSKSDYDLSTLIQECLSKIVKDDEEREIRETSLLEKLCANLKEQIINLEMEKL
YYEVELPLAFVLANMELEGFKVDGEMLENIGKKLQREIEKVQKEIYELADEEFNVNSPKQ
LGKILFEKLDLPVIKKTKTGYSTNAQVLEVLEDKHPIISKIGYYRQLTKLYSTYVEGLKN
VIDEDGRIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREVRKVFVPNYENSIILSADY
SQIELRVLAHIADDENLINAFKHHADIHTKTASEVFKVPIDEVTVNMRGNAKAVNFGIVY
GIGDFSLAKDLKISRKEAKGYIDTYFERYPNVKKYMDETIDKAKRDMYVTTILNRRRFIP
EIGNKNKIVKALGERLAMNTPIQGSAADIIKMAMVKVFNVLKERDLKSKIILQVHDELIL
NVYKDELEEIKSIVKDSMENVLPLSVPLEVDINEGENWYDAK
NT seq 2649 nt   +upstreamnt  +downstreamnt
ttgataggagagatattaatgcctaaaagggataaattagtaatattagatggtaatagt
ttaatgaatagagctttttatgctttaccaccattaactaaccatgagggagttcataca
aatgcagtatatggatttacaaacatgcttttaaaaattaaagatgatataaaaccagat
tatatagtgtgtacctttgataaaagtgcacctacatttagacatcaggcttataaagac
tataaagcaggaagaaagaaaatgccagaggaactaagggagcagtttcctatagtaaag
ggtttgctttctaaattggcaatagaaatttttgaaatagaaggctttgaagctgatgat
ttaataggtactttatctaaatttgcagaagaaaaagatatagaagtttacatagtaact
ggagataaagatgctcttcaattggcatcagatactacaaaaatattatttacaaagaga
ggtataactgaaagagaaatatatgacagacaaaaggtagtagatgaaatgggtgttact
cccactgagtttatagatgtaaaaggacttatgggagatccatctgataatatacctgga
gttcctggtataggagaaaaaactgcactaaagctcataaaagaatatagtagcgtagaa
aatgtattaaataatatagaaaatttaagtggtaaaaaattaaaagaaaatttaatagaa
aatagtgaacaggctatatttagtaaaaaactagctactattatgagaaatgttccaata
gacatagatttggaaaaaattaaatctaaagaagaatatgatatagaagcagtaagagaa
atatttataaaacttcaatttaagtctttaatagataaaatacctaaaggtgaaaatcat
aaagaagtagaagaggaagaagagctagtatatgaagaaattcatactatagaagattta
attaaattgtgtactgaaataggaaataaagatgaaaaaatatatgtaaattttaaaagc
actgatacaagtttatattctaaaatatctttagaaaaactatatatattatttaaaaat
aagtgctatgtagttaatatagaagaaagaattgaagaaaataaagataaaaccatagaa
atattaaaaactatttttgaaaaagaagccgtaagagtagtaagtcatgatgtaaaagtt
ctgtctatggctcttaaaaaattagatgttgaatttactaaagctttatttgatttgaaa
atagcagcatatcttatagattcttcaaagtcagattatgacttgtccacattaatacaa
gaatgtttaagtaaaatagtaaaagatgatgaagaaagagaaataagagaaacttcattg
ttagaaaaattatgtgcaaacttaaaagagcaaattattaatttggaaatggaaaaactt
tattatgaagtagagctaccgctagcttttgttttagccaatatggaattagaaggtttt
aaagtagatggagaaatgctagaaaatataggcaaaaagcttcagagggagatagaaaaa
gttcaaaaggaaatatatgaactagctgatgaagaatttaatgtaaattcaccaaaacaa
ttaggaaaaattttatttgaaaaattagatttacctgttataaagaagacaaaaacagga
tattccactaatgcacaagtcttagaagtcttagaggataaacatcctattataagtaaa
ataggttactatagacaacttacaaaactatattcaacttatgtagaaggattaaaaaat
gttatagatgaagatggaagaatacattcaagctttaatcaaactgtaacaactacaggg
agactttcaagcacagagcctaatcttcaaaatatacctataaaatatgaaatgggaaga
gaagtaagaaaggtatttgtaccaaattatgaaaatagtattatactatcagcggattat
tctcaaatagaattaagagttcttgcacacatagcagatgatgaaaacttaataaatgca
tttaagcatcatgcagatatacatacaaaaactgcatcagaagtttttaaagtaccaata
gatgaagtaacagttaacatgagaggaaatgctaaggcagtaaactttggaatagtttat
ggaataggagattttagtttagctaaagacttaaaaatatctagaaaagaagcaaagggg
tatatagatacttattttgaaagatatcctaatgttaaaaaatatatggatgaaactata
gataaagctaaaagagatatgtatgttacaacaattttaaacagaagaagattcatacct
gaaatagggaataaaaacaaaatagtaaaggctttaggggaaagattagccatgaataca
cctattcaaggaagtgccgctgatataataaaaatggctatggtaaaagtctttaatgta
cttaaagaaagagatttaaaaagtaaaataatattacaagttcacgatgagcttatatta
aatgtttataaagatgaattagaagaaattaaaagtatagtcaaagactctatggaaaat
gtattaccacttagtgtaccacttgaagttgatataaatgaaggagaaaattggtatgat
gctaagtga

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