KEGG   Chlorobaculum tepidum: CT1402
Entry
CT1402            CDS       T00088                                 
Name
(RefSeq) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cte  Chlorobaculum tepidum
Pathway
cte03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CT1402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cte03400]
    CT1402
Enzymes [BR:cte01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CT1402
DNA repair and recombination proteins [BR:cte03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CT1402
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PhoH PIF1 NTPase_1 Helicase_RecD nSTAND3 AAA_22 HHH AAA_16 AAA_29 AAA_23 AAA T2SSE RsgA_GTPase AAA_5 cobW NACHT ABC_tran AAA_28 AAA_7 SLFN-g3_helicase DEAD MeaB UvrD-helicase AAA_18 ATP_bind_1 AAA_14 Zeta_toxin AAA_17
Other DBs
NCBI-GeneID: 1006361
NCBI-ProteinID: NP_662288
CyanoBase: CT1402
UniProt: Q8KCL3
Position
1315434..1317638
AA seq 734 aa
MQKPADSHEERLSGSVERVTFHSEESGFTVLRLRVAGQREPVAVVGLATSPAVGEFMECV
GTWQNDRTHGLQFKASKITPAQPTTLEGKERYLASGQVKGLGNFYAKKLIERFGDAVFEV
IENDPERLLEIPGIGRKRLDMVVKSWAEQKAIRDIMLFLQSHGIGTARAWKIYRRYREQA
IATITENPYRLSLDIEGIGFQTADAIATSLGVAKNSLMRAEAGISHVLGELSQNGHCAVP
EETLIDEASRLLQIDHPLVVEAVKNEKLTRRIVGETIDGVPCIFLESLHRAETGVASGLH
RLMRGPLPWNALDPHDALPWIEETTALELSPSQRSAVTLVLASKVSIITGGPGVGKTTIL
KAILSVLQREKVSVALCAPTGRAAKRLTESTGIEAKTIHRLLEFDPQAFDFKRGRGNPLD
ASFVVVDETSMVDVVLMQKLVAAIPDHAAVVFVGDVDQLPSVGPGAVLADMISSEAIPTV
RLTEIFRQAAESMIVVNAHRINQGDMPLTAEGEELSDFYVVKAASAEEIHDKVIQLVTER
IPKRFGLDAVKDVQVLTPMNKGGVGVHALNAELQAKLNPASEPKVTRFGTTFAPGDKVIQ
TVNNYDKEVFNGDIGLIEAIDPEAEIATAFFFDHHRAEYDFNDLDELSLAYATSIHKSQG
SEYPAVVIPLAMQHFTLLERNLIYTAVTRGRKLVVIVAEPKALTLAIKNCKSKRRLTGLV
QRLRESGKQSWQNL
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgcaaaaacccgccgactcacacgaagagcgcctctccggttcagtcgagcgggtgact
tttcacagcgaggagtcgggcttcacggtgctgcgcctccgggtcgccgggcagcgtgag
ccggttgctgtggtaggcctcgcaacatcaccggcggttggagaattcatggagtgcgtc
ggcacgtggcagaacgaccgcacgcatggattgcagttcaaggcctcgaaaatcaccccc
gcacaacccactacactcgaaggcaaggaacgctacctcgcctccggacaggtgaaggga
ctcggcaatttctacgctaaaaagctgatcgagcgttttggtgacgccgtgttcgaagtg
atcgagaacgatccggagcggctgcttgaaatccccggcatcgggcgcaagcggctcgac
atggtcgtcaaatcgtgggccgagcagaaagcgatccgcgacatcatgctcttcctgcaa
tcgcacggcatcggtacagcgcgggcctggaagatttaccgccgctaccgcgaacaggcc
atcgcaacgatcaccgaaaacccgtaccgcctctcgctcgacatcgaaggcattggcttc
cagaccgccgacgccatcgccacgagcctcggcgtcgcgaaaaattcactgatgcgggcc
gaagcgggcatcagccacgtgctcggcgagctgtcgcagaacggccactgtgcggtgccg
gaagagacgctgattgacgaggcgtcgcgcctgctccagatcgaccatccgctcgtggtc
gaagcggtgaaaaatgaaaagctgacgcgccgcatcgtgggcgaaacgatcgacggcgtg
ccgtgcatcttcctcgaatcgctgcatcgcgccgaaacgggcgtcgcctccggcctgcat
cgcctgatgcgcggcccgctgccgtggaatgcacttgatccgcacgacgcgctgccgtgg
atcgaggagacgacagctctcgaactctcgccatcgcagcgcagcgcagtgacgctcgtg
ctggcgagcaaggtctcgatcatcaccggcgggccgggcgtcggcaaaacgacgatcctc
aaagcaatcctctcggtgctccagcgcgaaaaggtctccgtggcgctctgtgctcccacc
ggacgcgcggccaaacggctcaccgaatcgaccggcatcgaggccaagacgatccaccgc
ctgctcgaattcgacccgcaggcgtttgacttcaagcgcggacgcggcaacccgctcgac
gcctcgttcgtggtggttgacgaaacctcgatggtcgatgtggtgctgatgcagaagctc
gtggcggccatccctgaccacgcggcggtggtcttcgtcggcgacgtcgatcagctccca
tcggtcggtcccggcgcggtgctcgccgatatgatctcgtcggaggcgatcccgaccgtg
cggctcaccgaaatcttccggcaggccgccgagtcgatgatcgtcgtcaacgcccaccgc
atcaaccagggcgacatgccgctcaccgccgagggcgaggagctgtcggatttctacgtg
gtgaaggcggcctcggccgaggagattcacgacaaggtgatacagctcgtcacggagcgc
atcccgaagcgcttcggcctcgatgcggtcaaagacgtgcaggtgctcacgccgatgaac
aaggggggcgtcggcgtgcacgcgctgaacgccgagcttcaggcgaagctcaacccagct
tccgagccgaaggtcacgcgcttcggcaccaccttcgcgccaggcgacaaggtgatccag
acagtcaacaactacgacaaggaggtcttcaacggcgacattggcctcatcgaagcgatc
gacccggaggcggaaatcgcgacagccttcttcttcgaccaccaccgcgccgagtacgat
ttcaacgatctcgacgaactctcgctcgcctacgccacaagcatccacaaaagccagggt
tccgagtacccggctgtcgtcattccgctcgccatgcagcacttcacgctgctcgaacgc
aacctcatctacacggcggtcacgcgcggacgcaagctcgtggtgatcgttgccgagccg
aaagcgctcacactcgccatcaaaaactgcaagtcaaagcgccgcctgaccgggctcgtg
cagcggctcagagagtccgggaaacaaagctggcaaaatttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (36)   
   Pfam (36)   
All databases (64)   

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