KEGG   Yamadazyma tenuis: CANTEDRAFT_115002
Entry
CANTEDRAFT_115002 CDS       T03099                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
cten  Yamadazyma tenuis
Pathway
cten03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CANTEDRAFT_115002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cten03019]
    CANTEDRAFT_115002
Messenger RNA biogenesis [BR:cten03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CANTEDRAFT_115002
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CANTEDRAFT_115002
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 18247667
NCBI-ProteinID: XP_006687703
JGI: Cante1_115002
UniProt: G3BBA8
Position
Unknown
AA seq 202 aa
MLPPGLTANTPPSSSAISNGNGNGSVVLDNDMAKYGLQGVASLVKMDNPEKTTFSIGQDL
NLLGLDLGSNSQILKNLASPWSETSRSEVEPYFTLPESIQPQNIIPAPGPCDSKIQSFSD
ETLFYIFYMKPRDTLQEYAARELVARNWRYHKEIQVWLTKDSNVEPVLISQDVEKGVYIF
FDPHNWEKIKKEFVLHYSSVQA
NT seq 609 nt   +upstreamnt  +downstreamnt
atgcttccaccaggactaacggcgaataccccgccctcgtctagcgcgatatctaacggc
aatggcaacggctcagtggtcctagacaatgacatggccaagtacggcttacaaggcgtg
gcttcattggtgaaaatggataaccctgagaagacgaccttttccataggacaagatttg
aacctattgggattggacttgggttccaactcgcaaatcttgaagaacttggcatctcct
tggtcggaaacctcgcggtctgaggtcgaaccttacttcacattacccgaatccatccaa
cctcaaaatatcattcctgctcccggaccttgtgattccaagattcaatcgttttctgat
gaaacattattctacattttctacatgaaaccaagagacacgctccaagagtacgctgcc
agggaattggtggctcggaattggagataccacaaggaaattcaggtgtggttaacaaaa
gatagtaatgtggagccggtgttgatcagtcaggatgtggaaaagggtgtttacatcttt
ttcgatccacacaactgggaaaagattaaaaaggagtttgtattgcactattcatcagtc
caagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system