KEGG   Chroococcidiopsis thermalis: Chro_2109Help
Entry
Chro_2109         CDS       T02360                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cthe  Chroococcidiopsis thermalis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:cthe00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Chro_2109
Enzymes [BR:cthe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Chro_2109
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Chro_2109
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2359944..2360873
Genome map
AA seq 309 aa AA seqDB search
MPELPEVETVRRGANQVTLNREITGGDVLLDRTIAYPFSVADFLNGISGKAIAQWHRRGK
YLLAELVKGSREQGAIPSCKSQVASRKSQLIPNSEFRIPNSEFLGVHLRMTGQLLWLPQD
EPLHKHTRVRLFLAENWELRFVDQRTFGQMWWVPPERVVESVVTGLATLGPDPFSSDFSV
EYFATKLRDRRRPIKNALLDQSIVAGIGNIYADEALFRAGVQPQTLCADLRSPQISRLRT
AILEVLEASINAGGTTFSNFLNVQGVNGNYGGVAWVYNRAGKPCRICNTPILKLRLAGRS
AHFCPQCQK
NT seq 930 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaattgccagaggtagaaacagttcgacggggtgcaaatcaagtcaccctgaat
cgagaaattacgggtggggatgtgttgctcgatcgcaccatcgcctacccgttttctgtg
gcagattttctcaacgggatctcgggaaaagcgatcgcccaatggcatcgacgcgggaag
tatctgctggcagagttagtcaaagggagcagggagcagggagcaattccaagttgcaag
tcgcaagtcgcaagtcgcaagtcacaactaatcccaaattccgaattccgaattccgaat
tccgaatttcttggtgttcacttacgaatgactggacagctgttatggcttccacaggac
gagcctttacacaaacatacgcgagtccgattatttttggctgagaattgggaattgcgc
ttcgtcgatcaacgcactttcggacagatgtggtgggttcctccagaacgagtggttgaa
tcagtcgtgacgggattagcaacattgggtcccgatccgttttcttcagatttttctgtg
gaatattttgcgacaaaattgcgcgatcgccgtcgtccgatcaaaaatgccttattagac
caatcaatcgttgcaggaatcggtaacatctacgctgatgaagcgctgtttcgcgctggc
gtgcaaccccagaccttatgtgcggatttgcgatcgccacaaatatcgcgcctgcgaacc
gccattcttgaagtgttagaagcgagtatcaacgctggtggcacgacttttagtaatttt
ctcaacgttcaaggcgttaacggtaattatggcggtgtagcttgggtttataaccgagca
ggcaaaccctgccgcatctgcaatactcccatactaaaactacgtttagctgggcgatcg
gctcacttctgtccgcaatgccagaaatga

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