KEGG   Chlamydia trachomatis RC-F(s)/852: CTRC852_00790
Entry
CTRC852_00790     CDS       T02765                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cthf  Chlamydia trachomatis RC-F(s)/852
Pathway
cthf03030  DNA replication
cthf03410  Base excision repair
cthf03420  Nucleotide excision repair
cthf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cthf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTRC852_00790 (ligA)
   03410 Base excision repair
    CTRC852_00790 (ligA)
   03420 Nucleotide excision repair
    CTRC852_00790 (ligA)
   03430 Mismatch repair
    CTRC852_00790 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthf03032]
    CTRC852_00790 (ligA)
   03400 DNA repair and recombination proteins [BR:cthf03400]
    CTRC852_00790 (ligA)
Enzymes [BR:cthf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CTRC852_00790 (ligA)
DNA replication proteins [BR:cthf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CTRC852_00790 (ligA)
DNA repair and recombination proteins [BR:cthf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CTRC852_00790 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CTRC852_00790 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     CTRC852_00790 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CTRC852_00790 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 HHH HHH_3 DNA_ligase_ZBD PTCB-BRCT Transposase_20 BRCT_2 RlmA_N
Other DBs
NCBI-ProteinID: AGR95407
Position
163734..165725
AA seq 663 aa
MGAVSRDDYIALCTELVEHDRCYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPT
MYLGDRPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPGYSLELKIDGIAV
AIRYEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAPEDLEVRGEVFLSYEAFE
ELNACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLITDQKKRSHFENLQL
CSQWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTSK
HYRWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIE
KKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKEKVSVRCI
NPLCSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGF
KDRSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMS
IEGIGPKVAASIVAFFSKHENREEIRRMQELGVQVLSKQSDKEAPLQGKVFVLTGTLQQM
TRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESELLRILDAK
SVS
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgggtgctgtatctcgagatgattatattgctttatgcacagaattagtggaacatgac
cgatgctattatgtgctcaatcaaccgacgatttctgattacagctatgatgtgaaaatg
cgagagcttcaagaaatagaagttcagcatccggaatggaaggtttcatggtctcctacc
atgtatttgggggatcgtccttcaggacagtttcctgtggttcctcattctagtcccatg
ttgtctatagcgaatgtatactcattgcaagagctagaggaatttttttcccgtacagaa
aaattattggggtactctcctggatattctttagaactcaaaattgatggaattgctgtc
gccattcggtatgagaagcgattgtttgctcaagctttgagtcgggggaatggggtaaaa
ggagaagatattacagctaatgtcagtactatacgctctttacctatgagactccctcaa
gaggctcccgaggatctagaagtgcgaggagaagtgtttctttcatatgaagcgtttgaa
gagctcaatgcttgtcaacgggaacaagggaaactggaatttgctaatcctcgtaatgca
gctggaggaactcttaagcttttatcttctaaggaagctgctaagcgtaaattagacttg
tctgtttatgggttgatcacagatcaaaaaaaacgctcacattttgaaaatcttcagtta
tgctctcaatggggatttttcgttgcagggatgccgaaacaatgccgttcgagacaagag
gtggtagaacgtattcgagagatagaggagatgcgcgcagcgctcccgatggctatcgat
ggagtcgtcattaaagtagacaatattgcacaccaggatcggctaggtttgacgagcaaa
cattatcgttgggcgatagcttataaatatgctccggaaagagcagaaacgattttggag
gatattgtcgttcaagtagggaaaacgggtattcttactccggttgccgagttagctcct
gtttttttatctgggagccgcgtgtccagagcatccttatacaaccaggatgagattgaa
aaaaaagatattcgcatcggagattcggtgtatgtcgaaaaaggaggagaggttattccc
aaaattgttgggattaatttggctaagcgttcattagagagcgagccttggaaaatgcca
agcctgtgtcctgtatgtcatgaacctgttgttaaagagaaggtgtcggtgcgttgtatc
aatccactttgttcaggggggatgctagaaaagatctgtttctttgcaagtaagagcgct
ttaaacatagatcatttgggagagaaggtcgtaactaaattattcgaagtaggtctcatt
agttcttgttcagatatatttgctcttacagaagaagatttgaaacaggtccctgggttt
aaagatcgttctatacagaatttattggcaagcattgccggagccaaaaaggtggcatta
gatcggcttttaacggctctttctattccttttgtggggagctctggtgccatagctctg
gcagaccacttcggaactctggacaaagtaatcgaagcttctttagatgagctgatgtct
atagaggggattggtcctaaggtagctgcatcgatcgtcgcgttcttctcgaaacatgag
aatagagaggaaattcgtcggatgcaagagctaggagttcaggttctttctaagcaatcc
gataaagaggctcctttacaaggaaaagtgtttgttcttacggggactctccaacagatg
acgagaacgcaagcagaggagcgtatccgctccctaggggggaaagtgagctcttcggta
tcgaagagcacatatgccgtcatagcgggtagcgaagctgggggtaaattgaaaaaagct
caagatttaggtttaagtatttggaacgagagcgaattattaagaattcttgacgcaaaa
tcggtctcctga

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