KEGG   Caldimicrobium thiodismutans: THC_0905
Entry
THC_0905          CDS       T04224                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cthi  Caldimicrobium thiodismutans
Pathway
cthi03030  DNA replication
cthi03430  Mismatch repair
cthi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THC_0905
   03430 Mismatch repair
    THC_0905
   03440 Homologous recombination
    THC_0905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthi03032]
    THC_0905
   03400 DNA repair and recombination proteins [BR:cthi03400]
    THC_0905
Enzymes [BR:cthi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THC_0905
DNA replication proteins [BR:cthi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     THC_0905
DNA repair and recombination proteins [BR:cthi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     THC_0905
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: BAU23290
UniProt: A0A0U4W2J0
Position
906622..910056
AA seq 1144 aa
MADFVHLHLHTEWSLLDGAIRIEDLVKRLAEYKMPGCAITDHGTLYGLIHFYNKLRGAGL
KPLLGCEFYVAEGSRFQKKTNRKGEAGRHLILIAKNEEGYKNLIKLGSRAYLEGFYYRPR
IDKELLMEFHQGLICLSACLEGEIPHLLLQGLMDQAIESAQFYKNLFGEDFYLELQKNGL
SEQEKVNTGLLEISEKLGIKVVATADCHYLDKEDAFAHEVLLCIQTGKTLNDTDRFKFNT
DQLYLASAEEMEARFNEFPREILENTIEVFEKVNLELKFGTPLFPKARIPEGVTEVDYFI
QKAREGLSKRLKELKEKKLLFTEERAYWDRLEMELEVIVEKGYAGYFLIVADFCEWAKSQ
GIPVGPGRGSAAGALTSYALGITNLDPLRYGLLFERFLNKERPSLPDIDVDFCMEGRDRV
IEYVAKTYGESHISKIATFGQMKARQVIRDVGRALGFKPKEIDPIAKMISAGPEVKLFKE
VERPELKELMEKNEKIRELFTLALKLEGLPRHASQHAAGVLISSLPLEEITPLMKIEEGD
RVAQFDMKACEALGLIKFDFLGLKTLTIIDNTLKALKEYESIDLDLNSLPLDDPKTFKLL
QEGETDGVFQLESEGMKDLLRRLRPTDFNDLIAVLALYRPGPLEGGLVEQYIETKHGRRK
PEYLHPLLEPILKETYGVIVYQEQVMEIARAFAGYSLGEADLLRRAMGKKDKELMQRLKN
DFVERSIERGIPREVAEKVFELMEKFAEYGFNKSHSAAYALLSYQTAYLKAHYPVYFLAS
ILTYEINKSEEVSKYLSLAEKMGIPILPPEINLSSAGFSVEKSAIRIGLQAVKNVGEEAV
QEIIRKRPYKDFIDFCQKIDTQKVNRKTIETLIKAGAFDSIEPVRAKLLANLHRILGFTQ
ESKAGSLFGQNNLLNLNLSATLRLEEAPEWSPEEKLNFEKEALGFYLSDHPLRRFRPIVE
IFTPFHLDNVKELKNGGKIILCALISEIKLKNTRSGNKMALLNLEDEFSKLKALLFPEVY
REYMNLLKESALLWFKGYIDNEEDNFTFLVEELKPFEDLSFFIEGIMKLHIEHTLITEEN
LLRIRDSIKEIEEQEKGLPLRLILEYPDCLVYFEPNGYKIPLNLAFLEIFLENFEGLKLK
FENI
NT seq 3435 nt   +upstreamnt  +downstreamnt
gtggcagattttgttcatctccatctccatacggagtggagccttcttgatggagcaata
aggattgaggatctggtaaaaaggcttgcagaatataagatgccagggtgtgctattact
gaccatgggacactttatggattgattcatttttataataaactaaggggagcaggtctt
aaacctcttttgggatgtgaattttatgtagcagagggatcccgttttcagaaaaaaact
aaccgcaaaggtgaggctggaagacatcttatccttatagctaaaaatgaagagggctac
aaaaatctaatcaaacttggaagccgggcttatctggagggattttattatagacctcgc
atagataaagaattattgatggaatttcatcagggactaatctgtctttccgcttgcctt
gaaggggaaattcctcacttacttttacagggccttatggatcaggctattgaatctgcc
cagttttataaaaatctctttggagaagatttttatcttgagcttcaaaaaaatggcctt
tccgaacaggaaaaggttaataccggtcttcttgaaatttctgaaaaattgggaatcaaa
gtggttgctaccgctgattgtcattacttagataaggaggatgcctttgctcatgaggtc
ttgctctgcattcagacaggaaagactttaaatgataccgatcgtttcaagtttaacaca
gatcaactttatctggcaagtgctgaggagatggaggctcgcttcaatgagtttccccgt
gaaattttggagaataccatagaggtctttgagaaggttaatttagagcttaaattcggg
actcctctttttccaaaggcaagaattccagagggagtgactgaggtagattatttcatt
caaaaggcaagagagggactttctaaaagacttaaggaactcaaggaaaagaaacttctt
tttactgaagaaagggcatactgggatcgtttagagatggagcttgaggtgattgtggaa
aagggctatgcaggatattttctgatagttgcggatttttgtgagtgggccaaatctcag
ggaatacctgttgggcctggaagaggttctgcagctggagcactcacaagttatgccctt
ggaataacaaatcttgatcccttgagatatggacttctttttgagcgtttcctcaataaa
gaaagacccagtcttccagatattgatgtagatttttgcatggagggtagagacagggtc
attgaatatgtagccaagacctatggggaaagccacatttcaaagattgcaacctttggt
cagatgaaggcccgtcaggttataagagatgtaggtagagcccttggatttaaacccaag
gagattgatcctattgctaaaatgatttcagctggaccggaggtcaaactctttaaagaa
gtggaaagaccggagcttaaggaattgatggaaaaaaacgaaaagatcagggaacttttt
accttagctcttaagcttgagggtctcccaagacatgccagtcaacatgcagctggagtt
ttgataagctctttaccccttgaagaaattacgcctttaatgaaaattgaagaaggagat
agggtagcccagtttgatatgaaggcctgtgaggcccttgggttgattaaatttgatttt
ttgggattaaagaccctaaccatcattgataataccttaaaggccttaaaggagtacgaa
agcattgaccttgatttaaactcccttccccttgatgatccaaaaacctttaagctcctt
caggagggagaaacagatggtgtcttccaattagaatctgagggaatgaaagatttacta
agaaggcttagaccaacagattttaatgaccttattgctgttcttgctttatacaggcct
gggcctcttgaaggtggtcttgttgagcaatacatagaaacaaaacacggaagacgcaaa
ccagaatatcttcatcctttgctggaacccattttgaaagaaacttatggggttattgtt
tatcaggaacaggtgatggagatagccagagcctttgctggatactcccttggtgaggca
gatcttctacggcgcgctatgggtaaaaaggacaaagagctcatgcagagactaaaaaat
gactttgtggagcgctctatagagagagggatcccaagagaagttgctgaaaaggtcttt
gaattgatggaaaagtttgcagaatatggttttaataaaagccattccgcagcctatgcc
cttctttcttatcaaactgcctatcttaaggctcattacccagtctattttttagcctct
attcttacttacgaaataaataagagtgaagaggtaagtaaatacctttctttggctgaa
aaaatgggtatccccatacttcctccagaaattaatttaagttcagcaggattttcagtt
gaaaaatctgctataagaattggcctacaagcagttaaaaatgttggagaagaggctgtt
caagaaatcatccgtaaaagaccgtataaggattttattgatttttgtcaaaagatagat
acacagaaggtaaatcgtaagaccattgagacccttattaaggctggagcctttgacagc
atagagcctgtaagggcaaagttgctggctaatcttcataggatacttgggtttactcaa
gagagtaaagctggctctctttttggacaaaataaccttttaaacctaaacctatctgca
actttgaggcttgaagaggctcctgaatggagccctgaggaaaaacttaactttgaaaaa
gaggccttaggtttttatctttcagatcatcctttgagaagattccgtcctatagtagaa
atctttacaccctttcatctggataatgtaaaagaattaaaaaacggtggaaaaattatt
ctttgtgccttgatctcagagataaaacttaaaaatacaagaagtggaaacaaaatggct
cttttaaacttagaagacgaattttccaaacttaaagccttactttttcctgaagtttac
agggaatatatgaaccttctcaaagaatcagctcttttgtggtttaaaggttatatagat
aatgaagaggataactttacctttttagttgaagagcttaaaccctttgaagatttaagt
tttttcatagagggtataatgaaacttcacatagaacataccctaattacagaggaaaac
ctcctgagaataagagattctataaaagagatagaagaacaagaaaaaggtcttccatta
cgccttattcttgaatatcctgattgtttagtgtattttgaacctaatgggtataaaata
cccctaaacctggcctttcttgaaatctttcttgagaattttgaaggtctaaagcttaaa
tttgagaatatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (62)   

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