KEGG   Caldimicrobium thiodismutans: THC_1490
Entry
THC_1490          CDS       T04224                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau, partial
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cthi  Caldimicrobium thiodismutans
Pathway
cthi03030  DNA replication
cthi03430  Mismatch repair
cthi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THC_1490
   03430 Mismatch repair
    THC_1490
   03440 Homologous recombination
    THC_1490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthi03032]
    THC_1490
   03400 DNA repair and recombination proteins [BR:cthi03400]
    THC_1490
Enzymes [BR:cthi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THC_1490
DNA replication proteins [BR:cthi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     THC_1490
DNA repair and recombination proteins [BR:cthi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     THC_1490
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 RuvB_N AAA_5 AAA_30 AAA_16 AAA_14 nSTAND3 AAA_18 TIP49 ResIII Mg_chelatase AAA_19 AAA_assoc_2 AAA_7 Rad17 SLFN-g3_helicase Torsin DUF5906 SKI APS_kinase TsaE
Other DBs
NCBI-ProteinID: BAU23855
UniProt: A0A0U5AZC8
Position
complement(1483790..1485280)
AA seq 496 aa
MSYLVLARKYRPRRFSEVVGQSHVVKTLRNALRLGKLTHALLFSGIKGTGKTTIARIVAK
ALNCLNLQDGFEPCNECLNCQEINKGIFVDVLEIDAASNRGIDQVRELIETLKYAPARGR
AKVYIIDEAHMLTKEAANALLKSLEEPPSHVYFILATTEPNRLPPTILSRCQRYDFRRLD
LRTMVQFLKSISERESYAIESSALELIAKEAQGSMRDALSLLDQAMAYGVATKEELITAL
GWHEEALVEEIAQILLEKDLRKALTLSQNLFERGLDLIYLTEKLTEFFRALFLAKALPEE
SSLNLQNPRLRELLVITSQEDLLLILHTLLRDLEILKGTPYPQLQFELTLAKICEHGKLI
PLQEILKKLEDLSKNAEGLLIPQNLSPIESEKSWASFLETLKIESPPPYSLLSGLPEPEI
KAKEINLSLKANKDFLKSTYMPLLKEKVESYFGKKLNLIFETPKRATIEEVKDRPEVKLI
AQSFSAKIINIQPLKE
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagttatctggttttagcaagaaaatatcgtcccagaagattttcagaggttgtgggg
caatcccatgtagtaaaaaccttaaggaatgccctaaggcttgggaaacttactcatgcc
cttctcttttcaggaattaaaggaactggtaaaacaaccattgcaagaattgtagctaaa
gccttaaattgtctcaatcttcaagatgggtttgaaccctgtaatgagtgtctgaattgt
caggaaataaacaaaggtatctttgtagatgtccttgagatagatgcggcctcaaatcgt
ggtattgatcaagtaagggagcttattgaaactctaaagtatgctccagccagaggaagg
gctaaggtttacatcatagatgaagcccacatgttaactaaagaggcagccaatgccctt
cttaaatctttagaagaacccccttcccatgtttattttatacttgcaaccacagaacca
aacagacttcctccaactattctctcaaggtgtcaaagatatgactttagaagacttgat
ttaaggaccatggttcagtttctaaagagtatatctgagcgggagtcctatgccatagag
tcctctgctttagaacttattgccaaagaggctcaaggaagtatgagggatgccctttct
cttcttgatcaagctatggcttacggggttgcaaccaaggaagaacttattacagccctt
ggctggcatgaagaggccttagttgaggaaatagctcagattcttttagaaaaagatctc
cggaaggccttaactctcagtcaaaacctttttgaacggggacttgatcttatttatctc
actgaaaagcttactgaatttttcagagccctcttcttagccaaagccctacctgaagaa
agctctttaaatcttcaaaatcccagattaagggaacttcttgttattacttcccaggaa
gacctcttacttatcctccataccttactcagagaccttgaaattctcaagggcactccc
tatcctcaactacaatttgagctcaccttagcgaagatttgtgaacatggtaaactcatc
cctctacaggaaattcttaaaaaacttgaagatctttccaaaaacgctgaaggacttctt
atacctcaaaacttaagccctatagaatctgagaaaagctgggcttccttcttagagacc
ttaaaaatagagtctccccctccttatagtctcctttcagggttacctgaacccgaaata
aaggcaaaggaaattaacctttctcttaaggctaataaagactttcttaagtcaacctat
atgcctcttctcaaagaaaaggttgaaagttattttggaaaaaagctcaatctaatcttt
gaaacccctaaaagggcaaccatagaggaggttaaggatagacctgaggttaagcttatt
gcccagagcttttcagctaaaattataaacatacaacccctaaaggagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (47)   

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