KEGG   Thermochaetoides thermophila: CTHT_0000650
Entry
CTHT_0000650      CDS       T03100                                 
Name
(RefSeq) ATP-dependent RNA helicase-like protein
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
cthr  Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cthr03041]
    CTHT_0000650
   03009 Ribosome biogenesis [BR:cthr03009]
    CTHT_0000650
Enzymes [BR:cthr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CTHT_0000650
Spliceosome [BR:cthr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    CTHT_0000650
Ribosome biogenesis [BR:cthr03009]
 Eukaryotic type
  90S particles
   Helicases
    CTHT_0000650
  Pre-60S particles
    CTHT_0000650
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII ERCC3_RAD25_C SecA_DEAD
Other DBs
NCBI-GeneID: 18254103
NCBI-ProteinID: XP_006690619
UniProt: G0RYU9
Structure
Position
Unknown
AA seq 556 aa
MASESSKKRKFKDSKGPKPDEAVAKPSKFKKLKRDPTPEERETSDSESGNSDGQHEPDQV
DSDGEDAVSDDGSFDEKVAHQDEDGSRPENGTDLEDVPKNDNLLPPPTNAQEFSELNLSE
KTTKAIAEMGFTKMTEIQRRAIPPALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKP
RNGTGAIVVTPTRELALQIFGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIAT
PGRLLDHLQNTPFVFKNLKSLIIDEADRILEIGFEDEMRQIVKILPKEDRQTMLFSATQT
TKVEDLARISLRPGPLYINVDEEKKYSTVEGLEQGYVVVEADKRFLLLFSFLKKMAKKKI
IVFFSSCNSVKYYSELLQYIDLPVLDLHGKQKQQKRTNTFFEFCNAKSGTLICTDVAARG
LDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNGKGRSLLFLQPCELGFLAHLKAAKVPV
VEYDFPKNKILNVQSQLEKLISTNYYLNQSAKEGYRSYIHAYASHSLRSVFDVHKLDLVK
VAKVGDIPDPQPNTFG
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgtccgaatccagcaaaaagagaaaattcaaggattcgaaggggccgaagcctgat
gaggctgttgccaagccctcaaagttcaaaaagctgaagcgggatcctactcctgaggag
agagagacgagcgattcagagagcggcaacagcgacggccaacatgaacctgatcaggtt
gatagcgatggcgaggacgctgtctctgatgatggcagctttgatgagaaggtcgctcat
caggatgaagacggttccaggcccgagaacggcaccgatttggaggatgtccccaagaac
gacaaccttctcccacctcctacaaatgctcaagagttctcagagctgaacctttccgag
aagacaacgaaggcaatcgccgagatgggattcactaagatgactgaaattcaacggcga
gccattcctcctgcgcttgccggcaaggacgtcctgggcgcggcaaagacaggttccggc
aagactcttgccttcctcattccggctgttgaaatgcttagctcactgcgtttcaagccc
agaaacggtactggcgctatcgtggtgacacctacccgcgagctagcccttcagatcttc
ggcgttgcgcgcgagctgatgaagtatcattcgcaaacctatggtgttgtcattggtggg
gccaaccgtcgcgctgaggcagagaagctggggaaaggcgtcaacctcctcattgccact
cctggtcgcctactcgatcacttgcaaaatacccctttcgtcttcaagaacctcaagtcg
ctgatcatcgacgaggcagaccgcattttggaaataggtttcgaggatgaaatgcgccag
attgtcaagattctgcccaaggaggaccgtcaaaccatgctcttttctgctactcagaca
accaaggtcgaggacttggcgcgcatctcactgcgccccgggcccctctacatcaatgtc
gacgaagaaaagaagtacagcacagttgagggtctggagcagggttatgttgtggtcgag
gctgacaagcgcttcctcctgcttttctcgttccttaagaaaatggctaagaagaagatc
attgtcttcttctcgtcatgcaactcggttaagtattacagtgagctactgcagtacatc
gacttgccggttcttgaccttcatggcaagcagaagcagcagaagagaaccaacacattc
ttcgagttctgcaacgccaagtctggaactctcatttgcacggacgtcgcagcccgtggt
ctcgatattcctcaagttgattggattgttcagttcgaccctccggatgatccgcgcgac
tatatccaccgcgtcggtcggacagcccgtggcaacaatggtaaaggtcgttcgcttctt
ttcctgcagccttgtgagctcggttttctggcgcaccttaaggctgcgaaggtgcctgtc
gtcgaatacgacttccccaagaacaagatcctcaatgtgcagtcccagcttgagaagctc
atcagcaccaactattatctgaatcagagcgccaaagagggctaccggtcgtacatccac
gcctacgcttcccacagtctgcgcagtgtcttcgatgtccacaagctggatttagttaaa
gttgcgaaggtcggtgacatcccggatcctcagcccaacacatttggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (9)   
   PDB (9)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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