KEGG   Thermochaetoides thermophila: CTHT_0027940
Entry
CTHT_0027940      CDS       T03100                                 
Name
(RefSeq) putative RNA export mediator protein
  KO
K18723  nucleoporin GLE1
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03013  Nucleocytoplasmic transport
cthr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTHT_0027940
   03015 mRNA surveillance pathway
    CTHT_0027940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0027940
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTHT_0027940
SSDB
Motif
Pfam: GLE1 MR_MLE_N Adeno_E1B_55K_N
Other DBs
NCBI-GeneID: 18256832
NCBI-ProteinID: XP_006693251
UniProt: G0S7F3
Structure
Position
Unknown
AA seq 529 aa
MAGSSPLNHHLWSSPSRTVEEILAEDRNSEARHRYLLELARKEHERVREEAARIYREQLA
REERERLLAERRKEEERIRLEQQIAAENARLNALKATRIEIPPLLPDPVPAPSTVNGKPT
LPAAVATEAKRCPSEPSLVNGIASNGVVEAPAAASIKTLEPAKPAASAFKAAGSATTAAP
VAPIASVQPSTNGVVSAVASTPKTAPPAPTETPPDRYVEIHRNLKGLRKYMAEQAKTNLK
LKQRMGDMRREIRKSVGQLTTGGMAANKDKQQKIKSILTEALSNQVESALVDPNNFVVEP
RKPVEGATNNDPLLPSIFVYLINIFAKAAISQFINEAGARPETADPVGICVAAILSEPDF
LWRGASLIDILIAKFRIVCPVLFGYRGSEKTEQGRQRLGWWKESGQWISEQQHMDRMTGL
GAGFAAISLRKFALSKKQNPYPPRFYWMAMAKIVNTPPAEISNTQCVVLKAMVQNYEAKF
IEFYGSAAIAALRTALIDFPARAPHKSAAVNSLEVLAQMLKRDTGLDLG
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggccggttcttctcctttaaatcatcacctctggtcgagcccatcgcgaacggtcgaa
gaaatcctcgccgaagacagaaactccgaagcgcgccaccgctacttgctcgaactcgct
agaaaggaacatgaacgagtgagggaagaggcagcgcgcatataccgtgagcagctggct
cgagaagagagggagcgactcctcgcagagcgccgaaaggaggaagagagaatcaggctt
gagcaacagattgcggctgaaaatgcccggctgaacgctctcaaggcaacaaggatcgag
attcctccattactaccggatcctgtgcctgctccttcaacagtaaacggaaagccgact
ctccctgctgctgttgcgactgaggcgaagcgctgcccttccgagccttcgctggtgaac
ggcatcgcctcgaatggcgtcgtcgaagcgccagcagccgcttctatcaagaccctagaa
cctgcgaagcctgcggcgtcagcgtttaaagcagcgggctctgctacgactgccgcgccc
gttgcgcctatagcgagtgtgcaaccatcgacaaatggggtcgtctcggctgtcgcgtct
acacccaagacagctccaccggctccaaccgaaacacctcccgacagatatgttgagatt
cataggaacttgaagggcctccgaaagtatatggctgagcaggccaaaacaaaccttaaa
ttgaagcagcgcatgggcgacatgaggcgtgagatccgaaagtcggttggccaactcacc
acaggcggcatggctgccaacaaagacaagcaacaaaaaatcaagagcatcctcaccgag
gctctttccaaccaggtcgagtctgcgctagtggaccccaacaactttgttgttgaaccc
aggaagccagttgagggggcgacaaataacgaccctctgcttccatccatctttgtttat
ctcatcaacatctttgcaaaggctgccatctcccaattcatcaatgaagcgggagcgcgg
ccggaaaccgcagatcccgtcggcatttgcgtggccgccatcttgtcagagcctgatttc
ttatggcgcggggcttccttgattgacatcctgattgcgaagttccgaattgtctgccct
gtcttgtttggctatcgagggagcgagaagacggagcagggtagacagagactcggctgg
tggaaggaatcaggccagtggatttccgagcaacaacacatggaccgtatgacaggtctc
ggagccgggttcgctgccatctctcttcgcaagtttgctctctcaaaaaagcagaatcct
taccctccgcggttttattggatggcaatggcaaagatcgtcaatacccctcctgctgaa
atttccaacacccaatgcgttgtcttgaaagcgatggtgcaaaactacgaggcaaaattc
attgaattctacggaagcgctgccattgcggctttgcgtacggcgctcattgacttccct
gctcgggcaccgcacaaatcagctgcggtgaactcgctggaggttctggctcagatgttg
aagagagacactgggctggatcttggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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