KEGG   Thermochaetoides thermophila: CTHT_0033050
Entry
CTHT_0033050      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTHT_0033050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0033050
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CTHT_0033050
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CTHT_0033050
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 18257343
NCBI-ProteinID: XP_006693743
UniProt: G0S5I2
Position
Unknown
AA seq 367 aa
MWGAQGPRSLGAAAVHRGAPTPVSAQQAQQDDLFSSRLTGAQAGMRFGNQGSVAQAHGQV
PVPDDFPPLNRATNGDVGGQERGVMSNIAFGAQNVAPGSGVQNRANNGLLNALSATSRAG
DTRPQAAIARPQDARSPTGNDEAPQKDGMDAISGKNPHGAIGNDAPSGKGKEDEKPTRPP
AQDPLEGMAPADKWGIKGLRLLMNNFPDYNALACGIDPTTLNMDLRSSEPLSTKVYSLFD
DVPPRAPVPKFELPECYQVKNVQPIEAKISSFNEETLMWIFYSCPRDIKQQMAAIELNNR
NWRWHKKLQLWLTKDDLMAPQVLGPNHERGYYVVWDTVNWRKERRELTLHYADLDTNPGT
PLQSIAA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtggggggctcaaggaccacggagtctcggtgctgctgctgtacaccggggagctcca
acaccggtctctgcccagcaagcccagcaagatgatctcttttcttcgcggctaacaggt
gcccaagctggcatgaggtttgggaaccaaggaagcgttgcgcaggcacacgggcaagtg
cccgttccggacgacttccctcctctgaatcgggcaacaaacggcgacgttggtgggcaa
gagcgaggggtgatgtccaacattgcctttggtgcgcagaatgttgcaccagggtctggg
gtacaaaacagagcaaacaatggcctgcttaatgcactctcagctacatcacgcgccggc
gacactcggccacaggcagcgatagcgcgacctcaagatgctcgaagtccaacaggcaat
gacgaagctcctcaaaaagacggcatggatgcgatcagtggcaagaatccccatggtgcg
atcggtaatgacgctccatcagggaaaggaaaagaggatgaaaagcctacacgcccgcct
gctcaggatccgttagagggcatggcgcctgcggataaatggggcatcaagggcctgcga
ctgctgatgaacaactttcccgactacaatgcgctcgcatgtggaattgaccctaccacc
ctgaacatggacctccgttccagcgagccactgtcaacaaaggtctactctctcttcgac
gatgtgcctccgagggcgcccgttcccaagttcgaactaccggagtgctaccaggtcaaa
aatgtgcagccaatcgaggccaagatctccagcttcaatgaggagactcttatgtggatt
ttctacagctgtccaagagacatcaagcagcaaatggcagctattgagctgaacaaccgc
aactggaggtggcataagaagttgcagctgtggcttacgaaggatgacttgatggctcct
caggttcttggccccaaccatgagcgtggctactatgttgtctgggacactgtcaactgg
cgcaaggaacggcgcgagttgactctacattacgcggatctagacaccaaccccggtacc
ccgctgcagagcatagcggcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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