KEGG   Chlamydia trachomatis B/Jali20/OT: JALI_2561
Entry
JALI_2561         CDS       T00960                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ctj  Chlamydia trachomatis B/Jali20/OT
Pathway
ctj03030  DNA replication
ctj03430  Mismatch repair
ctj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JALI_2561 (dnaQ)
   03430 Mismatch repair
    JALI_2561 (dnaQ)
   03440 Homologous recombination
    JALI_2561 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctj03032]
    JALI_2561 (dnaQ)
   03400 DNA repair and recombination proteins [BR:ctj03400]
    JALI_2561 (dnaQ)
Enzymes [BR:ctj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JALI_2561 (dnaQ)
DNA replication proteins [BR:ctj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JALI_2561 (dnaQ)
DNA repair and recombination proteins [BR:ctj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JALI_2561 (dnaQ)
SSDB
Motif
Pfam: RNase_T QSregVF_b RNase_H_2 Rv2179c-like ExoX-like_C DNA_pol_B_exo2 DUF1340
Other DBs
NCBI-ProteinID: CAX10710
Position
294596..295294
AA seq 232 aa
MPALIFYDTETTGTQIDKDRIVELAAYNGTTSESFQTLVNPEIPIPAEATKIHGITTAEV
ADAPRFPEAYQKFIEFCGTDNILVAHNNNAFDYPLLVRECRRHGLSEPQLRTIDSLKWAK
KYRTDLPQHSLQYLRQVYGFEENQAHRALDDVITLYRVFSALVGDLSPDQIYDLLNETCH
PRIFKMPFGKYKGKPLSEVPSSYIAWLQKGDYLLQPENKEIKAAIEAYQQLK
NT seq 699 nt   +upstreamnt  +downstreamnt
gtgccagctttaattttttatgatacagaaacgacaggtacgcagatagataaggatcgt
atagtggagctagctgcttacaacgggactacgagcgagtctttccaaacgctagtaaac
cctgaaatccctatacctgctgaggcaactaaaattcatggtattacgactgcggaagta
gccgacgcccccagattcccagaagcttatcagaaatttatcgaattttgtggtacagat
aatattcttgtagctcacaataacaatgctttcgattatcctctgttagttcgtgaatgt
cgtagacacggcttatctgagcctcagcttcgtactatagattcgttaaaatgggcaaaa
aaatatcgaaccgacttgcctcagcatagtctccaataccttcgtcaggtatacggattc
gaagaaaatcaagcgcaccgagcattagatgacgtaatcactctttatagagtattttca
gctttagtgggggatttgtctcctgatcaaatttatgatctactaaatgagacttgtcat
cctcgcatatttaaaatgcctttcggtaagtataaagggaaacctctttctgaagtcccc
tctagttacatcgcctggttacaaaaaggtgattacttgctacaaccagaaaataaagaa
attaaagcagccattgaggcctatcagcaattgaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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