KEGG   Candida tropicalis: CTRG_03042
Entry
CTRG_03042        CDS       T01115                                 
Name
(RefSeq) pre-mRNA splicing factor PRP8
  KO
K12856  pre-mRNA-processing factor 8
Organism
ctp  Candida tropicalis
Pathway
ctp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_03042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctp03041]
    CTRG_03042
Spliceosome [BR:ctp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CTRG_03042
 Complex C
   U5 SnRNP specific factors
    CTRG_03042
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 8298528
NCBI-ProteinID: XP_002548745
UniProt: C5MAF0
Position
Unknown
AA seq 2393 aa
MGRKLPPPPPPPGISNAHKRRKENEPQKRQPPPPPPPPPPRSRNPPPAPPAPPPSGSQSD
KSNRPPPPPPPPSASNDSTKKRKWSNMAQNRHKSKHTGPIIPPKPEMPPQHLRKIMIDHG
DLSSNKVASDKRSHLGSLKYLPHALLKLLENMPQPWEQQKEVKVLYHTTGAITFVNEIPR
VIEPVYIAQWAATWNMMRREKKDRKHFKRMRFPPFDDEEPPLDWLENLEDVAPQDAIRLK
EIENDEELQDWFYDQKPLVEDSDIVNGESYKCWNLDLPTMDKLYQISKPILSQQEGSKFD
KRALFTAKSLNVALPGGPKFEPLFKDKINNPEFEDFTEFNSIDRIIFRTPVRTEYKVDYP
YLYNSFVKNVSLVPLNKTLSTTTHQSEKGLSSFTFNTKFNPIVPKKKRKSTRSEEVNELL
LDVEPLLSWTEVAQGNDDNIEEFKELLVEPKGTGSALNLLSAPYPFNRRSGRTVRAQDVA
LTKDWYVRSVPKGSTPKVRVSYQKLLKNSVLNELHNPSRRNKKTRRAKLLKTLKSTKYFQ
QTTIDWVEAGLQVCRQGFNMLNLLIHKRGLTYLHLDYNFNLKPTKTLSTKERKKSRFGNA
FHLIRELLRAIKIIVDSHVQYRLGNVDAYQLADGLYYVLNHLGQLTGIYRYKYKVMHQIR
QCKDLKHIVYQRFNKIIGKGPGCGFWQPAWRVWIFFLRGIIPLLERWLGNLIARQFEGRR
QNDVAKTITKQRVDAYYDIELRAQVMHDILDMIPEGLKQSKSKTILQHLSEAWRCWKANI
PWKVPGLPEPIEKIIERYIKAKADGWISVAHYNRERIRKGAHIEKTVARKNLGRLTRLWI
KSEQDRQTNFGKNGPFVSPDEAVKIFQTTVEWLESRKFSPIPFPPISYKHDTKLLVLALE
NLKESYSANSMLNSSQREELALIEQAFDNPHECLVRIKKFLLTQRIFKEVGLEMMDYYSH
LVPSYTVDPLEKITDAYLDQYLWYEADKRRLFPNWVKPSDDEIAPLLVYKWCQGINNLQD
VWQTRNGECNVMLETSLDKFAENIDFTLLNRLLRLVMDTNIADYITAKNNVNLTFKDMSH
VNQYGILKGLQFSSFVYQYYGLVVDLLILGLERASELAGSVQSPNNFLQFKDVETEVASP
IRLYSRYLDKIHILFRFDDEEASGLIQDYLSEHPDPNFENVVGYNNRRCWPRDSRMRLMR
HDVNLGRAVFWEISGRIPSSLTTIHWEDTFASVYSRDNPNLLFSMCGFEVRILPKVRANE
ISSSQEGVWDLVDYNTKERTAKAYLQVSQEAVDHFNNRIRQILMSSGSVTFTKVATRWNT
ALIALVTYFREAAIATPSLLDVLVKCETKIQNRVKMGLNSKMPSRFPPAVFYTPKELGGL
GMLSASHILIPASDLRWSKQTDTGITHFRAGMTHMEEKMIPTVFRYVTSWENEFLDSQRV
WAEYAIKRQEAIEQNRRLTFEDMEQNWDRGLPRISTLFQKDRHTLAYDKGHRIRREFKQY
SLARFNPFWWTNSNHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTGFDSWEGLFWEK
ASGFEDTLKFKKLTNAQRQGLSQIPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLHGK
IPTLKISLIQIFRAHLWQKIHESVVQDLCQVLDKELEVLQIDNVEKQAIHPRKSYRMNSS
SADIVLTSTYKWHVSRPSLLNDKDEEMSIPTNKFWIDVQLRYGDYDSHDISRYARSKFLD
YTTDGSSSYPSPTGIIIAIDLAYNMYDVYGNWFPGLKPLIHNAMREIMKANPALYVLRER
IRKGLQLYQSQPQEAFLNSNNYAELFNNDTQLFVDDTNVYRITVHKTFEGNLATKPINGC
IFILNPKTGQLFLKIIHTSVWAGQRRLGQLAKWKAAEEVAALIKSLPREEQPKQLIVSRR
GMMDPLEVHMLDFPNISIRPSELHLPFGAVMKIDKLSDIVLKANEPQMVLFNFYDDWLKH
ISPYTAFSRVILILRALNVDTDTTNHILRPNANIATEDHHIWPTLSDEQWVDVEAQLRDL
ILEDYSKKYNVNIQSLTQSEIRDLILGQDIRAPSVKRQEVTEIENGNGNKESENKELTAL
KTTTTNVHGEEITTVTTTNYEQSTFSSRNEWRNRAIAANNLHLRAKNIFVNSEEFIDDDS
FTYILPKNILQKLIQISDLRVQVGAFLYGTSPEDHNGVKEIKCIAIVPQLGNVNSIQFAQ
NLPQNIGYLENLELLGWIHTQSQDFSYMTSYDITTQSRFFDEYKPNFITMTVSYTPGSVT
VSSFELSKEGFEWGQSNSDMMSESPAGFKKDYAKKSQLIMSDQIAGTFMVPEDDVWNYFF
MGAIFNPKELYDLKVDIPLTFYDELHRPIHFTTFTQIENGNDEEELNQQDVFK
NT seq 7182 nt   +upstreamnt  +downstreamnt
atgggtcgcaaactacctccacctcctccacctcctggtatatctaatgctcataaaaga
agaaaggagaatgaaccacagaaaaggcaaccacctccaccacctcctcctcctcctccg
agatcacgaaacccaccaccagcaccaccagcaccaccgccttctggttctcagtccgat
aagtcaaatcgtcctccaccaccacctcctccaccatccgcttctaacgacagcacaaag
aaaaggaaatggtctaatatggctcaaaatagacataaaagtaagcatacaggtcctata
attcctcctaaaccagaaatgcctccacaacatcttcgaaagataatgattgatcatggc
gatttgtccctgaataaagttgcatcagataaacgatcacatttgggctcattgaaatat
cttccacatgcgttgcttaaattgttagaaaacatgcctcagccatgggagcaacaaaag
gaagtgaaagttctatatcacaccactggggccataacttttgttaatgaaattcctaga
gtgattgaaccggtatacattgcccaatgggcagccacctggaatatgatgagaagagaa
aaaaaggacagaaaacatttcaagagaatgagatttccaccttttgatgacgaagagccg
ccattggattggttagaaaatcttgaggatgtcgcgcctcaagatgcaattcgattaaag
gagattgaaaatgatgaagaacttcaggattggttttatgatcagaaaccattggttgaa
gattcagacatagtgaatggtgagtcctacaaatgctggaacctcgatttgcctacaatg
gataaattatatcagatttccaaaccgattttatctcagcaagagggctccaagtttgac
aagagagcattgtttacagcaaaaagtctcaatgttgcgcttcctggtggaccaaaattc
gaaccacttttcaaagataaaataaataacccagaatttgaggattttaccgagttcaac
tcaattgataggataatatttagaactcctgttagaacagagtataaagttgactaccct
tacttgtataattcatttgtcaaaaatgtgtcattggtgcctcttaataaaacgctcagt
actacaacacatcaatcagaaaaagggttatcatcatttacattcaataccaaattcaat
ccaattgtgccaaagaaaaaaagaaagtccacaagaagtgaggaagtgaatgaattgttg
ttggatgtggagccgttactaagttggacagaagttgctcaaggcaatgatgataatatt
gaagaatttaaagagttgctagttgagccaaaagggactggaagcgcattgaatcttctc
tcggcaccatatccgtttaatcgtcgtagtggcagaacagtacgtgcacaggatgttgct
ctcaccaaagattggtatgttcgttcagtcccaaaaggaagtacaccgaaagtacgtgtt
tcgtaccagaaattgttgaagaacagtgtattgaatgaattgcacaatccatcaagaaga
aataagaaaacaagacgtgcaaagttattgaagaccttgaaatcaacaaaatatttccaa
caaaccaccattgactgggtggaagctggtttgcaggtatgtcgacaaggatttaacatg
ttgaatttgttgattcacaaaaggggcttaacatacttgcatctagactacaatttcaat
ttgaaaccaacaaaaacactcagcacaaaggaacgtaaaaaatcgcgctttggtaatgcg
tttcaccttattagagaacttttacgagcaattaaaataattgttgactcccatgtgcaa
tatcgtttaggaaatgttgatgcttatcagttggccgatggactttattatgtattgaat
catttgggtcaactcactggtatttaccgatacaagtataaagtgatgcaccagatccgt
caatgcaaagatttgaaacatattgtctaccagaggttcaacaagataataggaaaagga
cctggatgtggtttttggcagcccgcttggagagtttggatcttctttttaagaggcatc
atcccgttgttggaaagatggttgggtaaccttattgctagacagtttgaaggaagaaga
cagaacgatgtggcgaaaactatcaccaagcagcgtgttgatgcatactatgatattgaa
ttacgtgctcaagtcatgcatgatatacttgacatgatccctgaagggttgaaacaaagc
aagtcaaagaccattcttcaacatttaagtgaagcatggcgttgttggaaagcaaatatt
ccttggaaagttcctggattacccgaaccaatagagaagatcatagagcgatacattaaa
gccaaagctgatggttggatttcagttgctcattacaacagagagaggatcagaaaggga
gctcacattgagaaaactgttgccagaaagaatttgggtagactcacaagactttggatc
aaaagtgagcaagacagacaaacaaactttggtaagaatgggccatttgtttctccagat
gaagctgtcaagatattccagacaacggttgaatggttggaaagccgaaagttcagtcct
attcctttccctccaatatcatataaacatgatacaaaattattagttctcgcgttggaa
aacttgaaggaaagctatagtgccaattccatgttgaactcttcacagagagaagaatta
gctttgattgaacaagcttttgataatccacatgaatgtttggttagaataaagaagttt
ttgttgacacaaagaattttcaaggaagtaggacttgagatgatggattattacagtcat
ttggtaccttcgtatacagttgatccattggagaaaataactgatgcatatttagatcaa
tacttgtggtatgaagcagataaacgaagattgtttccaaattgggtcaagccaagtgat
gatgagatcgctccattgttggtttataaatggtgtcaaggaatcaataatttacaggat
gtgtggcaaactagaaatggtgagtgtaatgtgatgcttgagacatcgttagataaattt
gccgagaatattgattttacgttgttaaatagactattgagattggttatggacaccaat
attgctgattatattactgctaaaaataatgttaatttgacatttaaggatatgagtcat
gttaaccagtatggtattctcaaaggtcttcagttctcgtcgtttgtttaccagtactac
ggcttagttgttgatttgttaattcttgggttagaaagagcatcagaattagctggatca
gtacagagcccaaataactttcttcaatttaaggatgttgaaactgaagttgcatcccct
attcgattatattcccgttacttggacaaaattcacatattattcaggtttgacgacgag
gaagcaagtggcctcattcaagactatttatcagaacatccagatccaaattttgagaat
gtagttggttacaataatcgccgctgttggccacgagactcaagaatgcgtttaatgcgt
catgatgtcaacttgggaagagcagtattttgggaaatcagcggtcgtattccttcatcg
ttgactactatacactgggaagacacatttgcatccgtttattcgcgggataatccaaac
ttattatttctgatgtgcggatttgaggtcaggattttacctaaagttagagctaatgaa
atcctgtcttcccaggaaggggtatgggatcttgttgattataacaccaaggaaagaacg
gcaaaggcatacttgcaagtgtcgcaggaagctgttgaccattttaacaaccgaattcgt
cagattttaatgtcttcagggtctgtcacatttacgaaggtagcaacaagatggaataca
gccttaattgccctagtgacatatttccgtgaagctgctattgccacgccatccttgtta
gatgtgcttgttaaatgtgaaacaaaaatacaaaacagagtgaaaatgggtctcaattcc
aaaatgccatcaagattcccacctgctgtgttttacactcctaaagaattgggtggattg
ggaatgttgagtgcatcgcatatcttgattccggcatccgatctccgatggtcaaaacaa
actgatactggaataactcatttcagagctggaatgacgcatatggaagaaaaaatgatc
cctacagtatttaggtatgtgacttcctgggaaaatgaatttttggattctcaaagagtt
tgggcggaatatgccatcaaacgacaagaagccattgaacaaaatagaagattgactttt
gaagatatggaacagaattgggacagaggattacctcgtatcagtaccttatttcaaaaa
gacagacacactttagcatatgacaagggccatagaataagaagagaattcaaacagtat
agtttagcacgattcaatccattttggtggacaaatagtaaccacgatggtaagttatgg
aatctcaatgcatatagaacagatgtcatacaagctttaggtggtattgagactattttg
gagcacactttgttcaaagggactggttttgattcatgggaaggcttattttgggagaaa
gcttcaggttttgaagatactttgaagttcaagaaattgacgaatgctcaaagacaaggg
ttgagtcaaattcctaatcgtaggttcacattatggtggtcacctacaattaatcgtgcc
aacgtgtatgtggggttcttggttcagcttgatttgactggtatctttctccatgggaaa
attccaacactcaagatatcgttgattcaaatatttagagctcatttatggcagaagatc
catgaaagtgtggtgcaggatttatgccaagttttggataaagaattggaagttttgcaa
atcgacaatgttgaaaaacaagctattcacccacgtaagtcctatcgaatgaactcatct
tctgctgatattgttttgacaagcacatacaagtggcatgtatctagaccttcattattg
aatgacaaggacgaagaaatgctgattcctacaaacaagttttggattgatgtccagctt
cgatatggtgattacgattcacacgacatatcacgttatgcaagatcaaagtttttggat
tacacaactgatggttcaagctcctacccatctcccacgggtattatcattgcaattgat
ttggcttataatatgtacgatgtttatggtaattggttccctggtttgaaaccattaatt
cacaatgctatgagagaaattatgaaggcaaatccggcattgtatgttttacgtgaacgt
attcgtaaaggtttgcaactttaccaatctcaaccacaggaggcgttcttaaattccaat
aattatgccgaattgtttaacaatgatactcaattatttgtcgatgataccaatgtttac
agaattaccgtccataaaacatttgaaggaaacttggcaacaaaaccaattaacgggtgt
atttttattctcaatccaaaaactggtcagttgttcttgaagatcattcacacgtcggtt
tgggctggtcaaaggcgtttgggtcagttagctaaatggaaagccgctgaagaagttgct
gcattgatcaaatcattgcctagggaagaacaaccaaaacaattaattgtcagtagacga
ggaatgatggatccgcttgaagttcatatgttggatttcccgaatatttctattcgacca
tcagagttacatttgccgttcggtgctgtgatgaaaattgacaaattatcagatattgtg
ttgaaagcaaatgagcctcaaatggttttgtttaacttttatgacgattggttgaaacat
atttcaccatacactgcgttttcaagagttattttgatattaagagcattgaatgttgac
actgacacgacaaatcatattttgcgtccgaatgccaatattgcaactgaggaccatcac
atttggccaacattgagtgacgaacaatgggttgatgtggaagcacaattaagagatttg
attttagaagactactcaaagaagtataatgtcaacatacaatctttaacccagtcagaa
attcgtgatttgatattgggtcaagatattagagcaccatcagtcaagcgtcaagaagta
acagaaatagaaaatggaaacggcaataaagagctggagaacaaggaattaacggcattg
aagaccactaccaccaatgtccatggtgaagagataactactgttacgaccactaattat
gaacagctgacattctcatccaggaacgagtggagaaatcgtgctattgcggcaaacaac
ttgcatttgagagcaaagaatatatttgtcaattctgaagagtttatcgatgatgattca
ttcacctatattttgccaaagaacattttgcaaaagctcattcagatttctgatttaaga
gttcaagtcggtgcatttctttatggtacctctccagaagatcataatggtgttaaggaa
atcaaatgtattgcaattgtaccacaattgggaaatgttaattctatacaatttgctcaa
aatcttccacaaaacataggatacctcgaaaatttagagcttttgggttggatccatacg
caatcacaagattttagctacatgacatcttacgatataactacccaatcacgtttcttt
gatgaatacaagccgaactttataaccatgacagttagctacacgcctggttcggtgaca
gtatcgtcttttgagttatccaaggaaggttttgaatggggacaactgaattccgatatg
atgtcggagtcacccgcaggattcaagaaagattatgccaaaaagagtcagttgattatg
tcagatcagatagccggtaccttcatggttccagaagatgatgtgtggaattattttttt
atgggtgccatatttaatcccaaggagttgtacgacttgaaggtcgacatcccacttaca
ttctatgatgagttacaccgtccaatacattttactacattcacgcagatagagaatggc
aatgatgaagaagagttgaatcaacaagatgtattcaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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