KEGG   Candida tropicalis: CTRG_03415
Entry
CTRG_03415        CDS       T01115                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
ctp  Candida tropicalis
Pathway
ctp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTRG_03415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_03415
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTRG_03415
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_C Herpes_UL16
Other DBs
NCBI-GeneID: 8302010
NCBI-ProteinID: XP_002549118
UniProt: C5MBH3
Position
Unknown
AA seq 1655 aa
MSTSLVELSKPSEKLEKSKDKLPLKPIQPTQYWTFDNVLTLLKDCQDPYLSDALDEFLLL
NSKVFLDPSPFTSQSDNETLNDDTKDISLRSVLYTNITPQIIKDAKIISTTLHLELKEVV
RVICQTNKKIPTRTTTWELEAIKSKLHDEKYYENKRLQLYIAKILRERRIVLRVVIELLS
NKTNNYASSVIQNLGKDVFLSKDYIKSLIESIAKTTQQLVRKSFTTGISKDIDNTILNET
ILFCIEASKVLIELSVQNPNVTGPIVQEWFKLMKDTNFALVLGPSIKYHESFAMVHGLFT
ILCVQYLDLTNSFDNVNQNASDETMMANIGIFKYINDAIANTSNTNPVVLYSWSIILLRK
FYFLQEYPSLPASTTFLKEFSFDHLENLINIINQKCSDLEIFVSLRKLNELLKFDKLYSG
ILSSLIIACMPLVTLSPDVTEAISSVIGNCPNHIIEGFFENKATTNAIIIARTKFPLMLN
PYIQLASINGNFALHEFNDLKSYIQVFKKGEFDKMYQIDDQNTELVKTTQFIDVYPPFET
NKKLSLVLSAGTKAKLLPSADPNEVLVTFLYNYNGWAFLGRVLQNVSKIFNNSDVVAIDL
VLNILNLLNKVVLDNGIDDTKLVLEAMSAYTDDSDILEVILRLLEQGLHLRNVKILVAVV
DLLTKLMPFLSYRIWPYLSKSALLATNGKEGLAAVIFGAVEMVNGDYSFTVSLIKLAEAL
TQNCLSLDQDYPKKSKSVIMRKFVGHLMDLFETFAYCRYEQPYEKLEIGVLVLDVLSTIL
ASVYGVDEGVPAHEKATKVFAESAQYILDAFLIPDETCSRAGAPIITMIENLSKDLELYE
LTDVSSFWHDNWIRCAFSFSQLIITIRSSLNFKPSSFEKKLFTKAPELVLSYSRYESVRK
EILDLLTCLTNGNWGTESPPSLLSHLGNFNAQVLLHSLAADLDNSFDDYKMKISLYDFIC
AVMNGKQEGLAVLFITGRDVFGDFTKKDENTKIETKVSLLQILKKNIRDMKYYPNSVSIH
LVDAISLACNSWTTVKESQHDEDFIKTLISRVKLQILDPPDSSESFISRCYELKLVSKIA
EILALYLFSTRNESCKKEILNFVNSDEFIDLARNKFSITNYQPNLDYNLQIAFENAFTGF
KLSQFTSGLTKRNRFGITSVYNLALMDSLFKNEPEWPQIREQIIASSINFQYLNSQFASA
KSFGALITSFCRRYEGALHARVLDFINDLLKLNINEGIPTDTFNSIYCERIELAFFLMYT
YFSKTKSQDADDRKIFEIIKSSSTLLSSSSMDFFANLAESKGYYKPLLKLLYCALNLIKS
DSKILAEYLSLFRDLFNNIVIKGTKVLLIEIQNDAYRSRSQRAFKSTKMNDRIDDLMIIL
SILKVFVKAKAGSMLHEEMAVSIDQHGTIKSLLNLYSFSHSIEVNDEFIFAQLSLMYLLE
LMSIQVIAEKIVSSGLFVVLLESPISQPIRAGGVSISHGAPYHRLWINGILPIIITSLFK
LGSSIVPEVCVALQLFGKQTQYGIDSWAQDASSIKISTGLVAETSEILLIYDLLKSMDVT
SYLRSIHAAHGGLTTTTATDDSTDLRVLPGLDSDAKRDDFIVCIENLLKHPKYLSSKISP
SSIEEQHIIQQGGDVFDKFVQTVVDEIRDFKDYFN
NT seq 4968 nt   +upstreamnt  +downstreamnt
atgtctacatcattggttgaattaagtaaaccgtcagaaaaactcgagaagagtaaggac
aagttacctttgaagccaatccaacctacccaatattggacttttgataatgttttgact
ttattaaaagactgtcaagatccttacttgtctgatgcattggatgaatttttactatta
aacagcaaggtatttttagatccatccccatttacatcacaactggataatgagaccttg
aatgatgataccaaagatatatcacttagaagtgttttatataccaatataactccacaa
atcatcaaagatgcaaagatcatttctaccactttgcatttggaacttaaagaagtagta
agagtcatatgtcaaaccaacaaaaagattcccacaagaaccaccacttgggaattggaa
gccattaaaagcaaattgcacgatgaaaagtattatgaaaacaagagattacaattgtac
attgccaaaattttaagagaaagaagaattgtcttgagagttgtcattgaacttttgagt
aataaaacaaacaattatgcatcatctgtaatacaaaatttaggaaaagatgtcttctta
tccaaagactatatcaaatccctcattgaatctattgcaaagactacacagcaattagtc
agaaagagcttcacaaccggaatttccaaagatatcgacaatactatcctcaatgaaact
atattgttttgtatagaagcaagtaaagttttaatcgaattgtctgttcagaatccaaat
gtaacaggtccaattgtacaagaatggttcaaattaatgaaagatacaaattttgccctt
gttttaggaccttcaattaagtaccatgagtcttttgccatggttcatgggttattcacc
atattgtgtgtacaatacttggacttgactaacagttttgataatgtcaatcagaatgca
agtgatgaaaccatgatggctaatattggaatctttaaatacattaatgatgccatcgcc
aatacatccaacactaatcctgttgttttatacagttggtccattatattgttgagaaaa
ttttattttttacaagagtatccttccttgccagcttcgacaactttccttaaggaattc
agttttgatcatttggagaatctcataaacatcatcaaccaaaaatgttctgatttggaa
atttttgtttccctaaggaaattaaacgaattgttgaaatttgataaattatactcagga
attttgtcttccttgataattgcatgtatgccattggttactctttcgccagatgtcacg
gaagctatatcaagtgtcattggcaattgcccaaatcacattatcgaaggattttttgaa
aacaaagccaccaccaatgccataattattgcccgtaccaaattcccattgatgttaaac
ccatacatacaattggcttctattaacggtaattttgctttgcatgagttcaatgattta
aaatcatatattcaagttttcaagaagggcgaatttgacaaaatgtaccagatcgatgat
caaaacactgaattagtcaagactacacaattcattgatgtataccctccatttgaaacc
aacaagaaattgtctttagttttaagcgcaggtacaaaagctaaattattaccttctgct
gatccaaatgaagtcttggtcacctttttgtataattacaatggatgggcatttcttgga
agagtcttacaaaatgtttctaaaatttttaacaattcagatgtcgttgcaattgatttg
gttcttaatattttgaatttgttgaacaaagttgtactcgacaatggtattgatgatacg
aaattggttttagaggccatgtctgcttatactgatgattcagatattctcgaagtgatt
ttacgactcttggaacaaggattgcatttgagaaacgtcaagatcttagtggctgttgtt
gacttattaaccaaattaatgccatttctttcatacagaatctggccatatttatccaag
tctgctttattggcaaccaatggaaaagaaggtttagctgcggttatatttggtgccgtt
gaaatggtcaacggagattatagcttcacagtttcgttaatcaaattggcagaagcatta
acacagaattgcttgtcattggaccaggactaccctaaaaaatccaagagcgtaatcatg
cgtaaatttgtgggtcacttgatggatttatttgaaacttttgcttattgtaggtatgaa
caaccatatgagaagttggaaattggtgttttggtattagatgtactctcaactattctt
gcaagcgtttatggtgttgatgaaggagttcctgctcatgaaaaggctaccaaagttttt
gctgaatctgcccagtatattttggatgcattcttaataccagatgaaacatgctcacgt
gctggtgccccaataattacaatgattgaaaatctttcaaaggatttggaattgtacgag
ttgactgatgtgtcatccttttggcatgataactggatccgttgtgccttttccttttct
caactcatcatcactataagatcatctttgaattttaagccactgtcatttgaaaagaaa
ttgtttaccaaagcaccagagttggttttgtcgtattctagatatgaatcagtcagaaaa
gaaatcttagatcttttgacttgtttgactaatggtaattggggaactgaatctcctcct
tctttattatcacacttgggtaacttcaacgcacaagtgttgttgcattccttggctgca
gacctagacaattcttttgatgattacaagatgaagatttctttgtatgattttatttgc
gctgtaatgaatggcaaacaagaaggtcttgctgtattgttcatcacaggaagagatgtt
ttcggtgattttactaaaaaagatgaaaatacaaagattgaaaccaaagtgtcattattg
caaattttgaagaagaatattagagatatgaaatactacccaaattcagttagcatccat
ttggttgacgctatttctttggcatgtaattcatggaccactgtgaaggaaagccaacat
gacgaggatttcatcaaaactttgattagccgtgtgaaattacaaatattagatccccca
gattcatcagaaagcttcatcagtagatgttatgaattgaaacttgtatctaaaattgcc
gagattttggcactttatctattctccacacgaaatgaatcctgtaagaaagagattctc
aattttgtcaattccgacgagtttattgatcttgccagaaataagttttccatcaccaat
tatcaacctaatttggattataacttgcagatagcgtttgaaaacgctttcactggattt
aaattatcacaattcaccagtggcttgacgaagagaaatagatttggtattacttctgta
tataacttagcactcatggactcattatttaaaaatgaaccggaatggccgcaaattaga
gaacagattattgcatctagtatcaattttcagtacttaaactcccaatttgctagcgcc
aaatcatttggtgctctcattacaagtttctgcagaagatatgaaggtgcattgcatgcg
agagttttagattttattaatgacttgttgaaattgaatatcaatgaaggaataccaacc
gacacatttaactcaatttattgtgaaagaattgaattggcattctttttgatgtacact
tacttttcgaaaacaaaatcacaagatgctgatgacaggaaaatatttgagattattaaa
agcagttcaactttgttatcttcgagtagtatggatttctttgcaaatttggctgaatct
aaaggatactataaaccattattgaagcttttatattgtgccttaaatttaatcaagagt
gattcaaaaatcttagctgaatatttgagtttgttcagggatttgtttaacaatattgtt
ataaaggggacaaaggtgttgcttattgaaatacagaatgatgcataccgttcaagaagt
caaagagcatttaagtcaaccaaaatgaatgatagaatcgatgacttaatgattatattg
tctatcttgaaggtatttgtcaaagcaaaagctggatccatgttgcatgaggaaatggct
gtctcgattgatcaacacggaactataaaatcattattgaatctttattcattctcccat
tcaattgaagttaatgatgaatttatatttgcacaattaagtttgatgtatttattggaa
ttaatgtcaattcaagtgattgcagaaaagattgtctcatccggattatttgtggttttg
ttggaaagtccaatttcacaaccaatcagagctggtggtgtttcaataagtcatggtgct
ccatatcatagactttggattaatggcatattgccaattattattactagtttgttcaaa
ttgggatcctcgattgtgccagaagtatgcgttgctttacaattatttggaaaacaaact
caatatggcattgatagttgggcacaggatgcgtccagtattaaaatatccaccgggttg
gttgcagaaacaagcgaaatattgttgatttacgatttacttaaatcaatggatgtcact
tcttatttgagaagtattcacgcagctcatggaggtctcaccaccacaactgcaacagac
gattctactgatttaagggttttgccaggattggattctgatgctaaaagggatgacttt
attgtgtgtattgagaacttattgaaacacccaaagtatttgagttctaaaataagtcca
agttctattgaagaacagcatatcatccaacaagggggtgacgtgtttgataagtttgtt
caaacggtcgttgacgaaattagagatttcaaagattatttcaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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