KEGG   Chlamydia trachomatis D/UW-3/CX: CT_781
Entry
CT_781            CDS       T00017                                 
Symbol
lysS
Name
(RefSeq) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
ctr  Chlamydia trachomatis D/UW-3/CX
Pathway
ctr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ctr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CT_781 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ctr01007]
    CT_781 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ctr03016]
    CT_781 (lysS)
Enzymes [BR:ctr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CT_781 (lysS)
Amino acid related enzymes [BR:ctr01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CT_781 (lysS)
Transfer RNA biogenesis [BR:ctr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CT_781 (lysS)
 Prokaryotic type
   Other AARSs
    CT_781 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d GCR1_C
Other DBs
NCBI-GeneID: 884579
NCBI-ProteinID: NP_220300
UniProt: O84786
Position
916214..917794
AA seq 526 aa
MSVEVEYLQHEDYLYRTSKLKEIRDLGINPYPYQYTDCLEVQEIRNQFVDNELGDSEAAF
RKETPKVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFI
EKKLDLGDILGLEGYLFFTHSGELTVLVETVTLLCKSLISLPDKHAGLADKEIRYRKRWA
DLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTLQALHA
EMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNPEFTMIEAYAAYWDYNDVMK
CVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHAD
HELRKILETQTSLPEKTYVHASRGELIALLFDELVCDKLIAPHHITDHPLETTPLCKTLR
SGDETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLE
ALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPVMRRIEAKKD
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgtctgtagaagttgaatacttgcaacacgaagattatttgtatagaacaagcaagcta
aaggaaatcagagatttgggcataaatccttacccttatcaatacactgattgtcttgaa
gtacaggaaattcgtaatcagtttgtagataacgaattaggagatagcgaagcggctttt
cgtaaagagacacctaaggtgcgttttgccggacgacttgttcttttccgttctatgggg
aaaaattcttttgggcagatcctcgataatgatgcaaagattcaagtgatgtttaatcga
gatttttctgcagtggcagggttagccgcggatgctgggatttctccgattaaatttatt
gagaagaaacttgatctaggagacatcttgggtctcgaagggtatcttttctttactcac
tcaggagaattaacggttctcgttgaaacggtaacgttgttatgtaaatccttaatttct
ttgcctgataagcatgcaggattagcagataaagaaattcgctatcgcaaacgttgggca
gatctgatttcctcagaggatgtgcgtaagactttcttaacaagaagccggattcttaag
ttgattcgtgagtacatggatcagcagagctttttagaggtggaaactcctatcctgcaa
accatctacggaggagcagaagcaactccttttgttaccacgctgcaagcgctacatgca
gaaatgttcctaagaatttctctagagattgctttgaaaaaactccttgttggaggaatg
tcccgagtttatgaaatcggcaaagttttccgtaacgaaggaatcgatagaacgcataat
ccagagtttaccatgatagaggcttatgcggcttattgggattacaatgatgtaatgaaa
tgtgtggaaaaccttgttgagtatatcgtacgtgctttgaataacggggaaactcaggtt
cagtattcacatttaaaatcaggacctcaggttgttgattttaaagctccatggatccgt
atgacgatgaaagaaagtatctctgtctatggcggcgtcgatgtagacttacatgcagat
catgaattacgtaaaattttagaaacacaaacatctcttccagagaaaacgtatgttcat
gcctcacgaggagagctgatcgctttgctatttgatgagctggtttgtgataagctcatc
gctccgcatcacattacagatcatccattagaaacaacgccactttgtaaaacattgcgt
tctggggatgaaactctggtagaacgatttgagagtttttgtttaggaaaagagttgtgt
aatgcttattcggaactcaatgatcctttacaacaacgaaaattgttggaagagcaaatg
cgtaaaaaggctttaaatcctgacagcgaataccatcctatagatgaagaatttctagaa
gctctttgccaaggaatgcctcctgcaggaggatttggaataggtatcgatcgattggtt
atgatgttgacagacgccgcatccattcgggatgtcctgtttttccctgttatgcggcgt
atagaagcaaaaaaagattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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