KEGG   Chloroherpeton thalassium: Ctha_1408
Entry
Ctha_1408         CDS       T00726                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
cts  Chloroherpeton thalassium
Pathway
cts03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cts00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ctha_1408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cts03400]
    Ctha_1408
DNA repair and recombination proteins [BR:cts03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ctha_1408
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH_2 UVR GIY_YIG_domain HHH Ribosomal_S13 DUF5799 5_3_exonuc
Other DBs
NCBI-ProteinID: ACF13871
UniProt: B3QRR8
Position
complement(1651684..1653606)
AA seq 640 aa
MNQESLEPNSAAGSPNENGETSEKKLSEALQFKLKNLPTSPGVYQFKDKDERVIYVGKAK
NLRARVQSYFRNLSEHSGKTRLLVRRIMDLELILTGTEVEALILENNLIKQLKPRYNINL
KDDKSYPYIVVTNEPFPRVFPTRNVRRDGSKYYGPYTETRQMRMLLDAISEIFQVRSCSL
NMTDENIAARKFKVCLDYHIKKCLGPCEALQSREDYDAMIDEVKKLLRGKTKDIVRSLES
RMKNYAKELKFEYAAEIKRQLEALERYSARQKVLTTDEIDRDIFAVAREGDDACGTVFKV
RDGKLLGSQHFYFSNVEDEPMANLVGRLLEKYYLETTDILPNEIFTAEQPSNQDAIEALL
QKRMSEIGEQKKVHFVIPQIGDKAKLVDMCAANAKHLLSEYQLQKQKRGEAKAIPHAVRS
LERDLRLAKPPRRIECFDNSNFQGTDPVASMICFVDGKPKKSDYRRFKIKTVEGANDFAS
MAEIIERRYTGSLAESLPMPDLIVVDGGKGQLSSAYAVLQKSGVGVPVIGLAKRLEEVFF
PNEQLPHNLPKTSSSLKLLQQVRDEAHRFAITFHRELRSKRTLQTELTEIEGIGKTKAEK
LLKTFGSVAEVKKASAEALAEAVGKKAAERIFAHFQGKAD
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgaatcaagaatcacttgagccgaattcagcagccggttcgccaaacgaaaacggcgaa
acatcggagaaaaagctttcggaagcacttcaattcaaattgaaaaacctgccgacctca
cccggcgtgtatcaatttaaagataaagacgagcgggtgatttatgtcggcaaggcgaaa
aatttgcgcgctcgcgtgcaatcctatttccgaaatttgtcggagcattcgggaaaaacg
cgcctgctcgtgcgccgcatcatggatttggaattgattttgaccggtacggaagtcgag
gcgctcattttggaaaacaacctcatcaagcagctcaagccgcgctacaacatcaacctc
aaagacgacaaaagctacccctatattgtggtcacgaacgaaccatttccgcgcgttttc
ccaacgcgaaatgtccggcgcgacggctcaaaatattacggtccctataccgaaacgcgc
caaatgcgaatgctgctcgacgctatcagcgaaatttttcaagtgcgcagttgcagtttg
aacatgacggacgaaaacattgcggcgaggaaattcaaagtttgtttggattatcatatc
aaaaaatgtctcggtccgtgcgaggcgctccaaagccgcgaagattatgacgcgatgatt
gacgaggtgaaaaagctgctacgcggcaaaaccaaagacatcgtccgctcactcgaatcg
cgcatgaaaaattacgcgaaggaactgaaattcgaatacgccgctgaaatcaagcggcag
cttgaggcgctcgagcgttactcggcgcggcaaaaagtgctcacaacggacgaaatcgac
cgcgatatttttgccgtcgcccgcgaaggcgatgacgcttgcggcacggtcttcaaggtg
cgcgacgggaaattgctcggctcgcagcatttttatttttcaaatgtcgaggacgaaccg
atggcaaacctcgtcgggcggctgcttgaaaaatattacttggagacaacggacattttg
ccaaatgaaattttcaccgccgaacagcccagcaatcaagacgccattgaggcgctgctg
caaaagcgcatgagcgaaataggcgagcaaaagaaagttcattttgtgattccgcaaatt
ggcgacaaggccaagctcgtggacatgtgcgcggctaacgctaagcatttgctcagcgaa
tatcagcttcagaagcaaaagcgcggtgaggccaaagccattccgcacgccgtgcgctcg
ctcgagcgggacttgcgccttgcaaagccgccgcgccgcatcgaatgttttgacaattca
aattttcaaggcaccgaccccgtcgcgtccatgatttgcttcgtcgatggcaagccgaaa
aaatccgattatcgacgatttaaaattaagaccgtcgagggcgcaaacgattttgcctcg
atggccgaaatcattgagcgccgctacaccggctcgctcgccgaatcgctcccaatgccc
gatttgatcgtcgtggacggcggcaaagggcagctttcgagcgcgtatgcggtgttgcaa
aaatcgggcgtgggcgttccggtcatcggccttgccaaacggttggaggaagtttttttt
ccaaatgagcaactgcctcacaatttgccaaaaacctcatcgtcgctcaagcttttgcag
caagttcgagacgaagcgcatcgctttgcgattacattccatcgagaattgcgctcaaaa
cgcacgctgcaaaccgagctaacagaaattgaaggcatcggaaaaacgaaggcggaaaag
ttgctcaagacgtttgggtcggtggctgaggtcaaaaaagcatcggcagaagcgcttgcg
gaggcggtcgggaaaaaagcagcggagcgcatttttgcgcattttcagggaaaagccgat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (58)   

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