KEGG T01933: Clo1313

Clostridium thermocellum DSM 1313: Clo1313_2609

Entry

Clo1313_2609 CDS T01933

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

ctx Clostridium thermocellum DSM 1313

Pathway

ctx00473	D-Alanine metabolism
ctx00550	Peptidoglycan biosynthesis
ctx01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:ctx00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:ctx00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp RimK ATP-grasp_3 GARS_A ATPgrasp_ST MCR_beta_N

Other DBs

NCBI-GI:

385779895

NCBI-GeneID:

12422353

UniProt:

E6UQS0

Position

complement(3074441..3075571)

AA seq 376 aa
MGDKKRVLVIFGGQSSEHEVSRISATSILKNINLDKFDVSMIGITKDGKWLYYDGPIDKI
PSGEWEEIALKDGTRSIADRVSLFDNIISCKNNACGLEKASENEKSKKIDVVFPVLHGCN
GEDGTIQGLFELAGIPYVGCGVLASAVGMDKIYAKIIFEKAGIPQADYLYFTRKEIYGDV
EGVVDKIEEKFSYPVFVKPSNAGSSVGVSKAHDKNELKEALIYAARYDRKVLIEEFINGR
EVECAVLGNDDPVASTVGEIIPGNEFYDYKAKYIDNTSKIKIPADLPEETVEQIRNYAVK
AFKALDCSGLARVDFFVHKETGKVYINEINTMPGFTSISMYPMLWEESGISYPELIEKLI
DLAVQRYNDNLKEYDE

NT seq 1131 nt +upstreamnt +downstreamnt
atgggcgataaaaaaagagtactggttatttttggcggacaatcgtcggaacacgaagtt
tcaagaatatcggcaacatccatactgaagaacattaatttggataaattcgatgtttca
atgataggaatcacaaaagacggaaagtggctttattatgacgggcctattgataaaatt
ccttccggagagtgggaggaaatcgcactgaaagatgggacaagaagtattgccgacaga
gtgagcctgttcgacaacataataagttgcaaaaataacgcatgcggccttgaaaaggcc
tcagagaacgaaaaaagcaaaaagatagatgtggtttttccggttctgcacggctgcaac
ggtgaagacgggaccatccagggactttttgaactggcgggcattccttatgtgggctgc
ggtgtgctggcttcagcagtcggaatggataagatttatgcaaagataatttttgaaaaa
gccggaataccccaggcggattatctgtatttcacaagaaaagaaatttacggggatgtt
gagggtgtggttgacaaaatagaggagaaattttcatatcctgtatttgtaaaaccgtcc
aatgccggttcttccgtaggtgtgtcaaaggcgcatgataaaaatgagcttaaagaggca
ttgatttatgccgccaggtatgatagaaaagtactgattgaggaatttatcaacggaaga
gaagttgagtgtgccgtgctggggaatgatgatcctgtggcatcaacggtgggagaaatc
attccgggaaatgaattttacgactacaaggcaaaatacattgacaatacttccaaaata
aaaattcccgcggatcttccagaagagaccgtggaacaaataagaaattatgcagtaaag
gcattcaaggctttggattgttcgggacttgcaagagttgacttttttgtgcacaaggaa
accggaaaagtttatataaatgaaattaatacaatgccgggatttacaagtataagcatg
tatcccatgctttgggaggaatccggcatttcctatccggaacttattgaaaagctgatt
gacttggctgttcaaagatacaatgacaatctcaaagaatatgatgagtag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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