KEGG   Ruminiclostridium thermocellum DSM 1313: Clo1313_2922Help
Entry
Clo1313_2922      CDS       T01933                                 

Definition
recombinase D (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ctx  Ruminiclostridium thermocellum DSM 1313
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctx00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    Clo1313_2922
Enzymes [BR:ctx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Clo1313_2922
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3428203..3430434)
Genome map
AA seq 743 aa AA seqDB search
MVTIEGTVEEIIFSNEANGYTVCEIKCDKEVITVVGYMPFINVGETLRVSGKWVIHPDYG
EQLKVELYEKLLPETPEAIERYLASGLIKGVGPATAKKIVKKFADQTLHIISHHPQRLAE
IKGITMEKALRIGQAFEEQRGLRDVVLFLQEYGISPTYCAKIYKTFGPDTIEEIRKNPYR
LSDEIFGISFRTADRIAKSLGIDPYSKYRISSGIKYVLSRAATEGHTFLEEEMLKSYTSK
LLDINIDSIEDALVSLVLNKSVYVDRNDGMSKIYLSSFYHAELGVCRKLVELSQVRYSAD
MEDFEERIKQVQKKEGIILADKQKEAIREAMTNGVLVITGGPGTGKTTIIKSIISLLESE
GYEFALAAPTGRAAKRMSEATGYEAKTIHRLLEIGYTSNEDELVFMRTEDNPIEADVVII
DEMSMVDIILMYHLLKAIVCGTRLILVGDVDQLPSVGPGNVLRDIIKSGMIKTVKLSEIF
RQAGESMIVVNAHRINRGEHPILNEREKDFFFVTRNSQNDILKTVVDLCTRRIPDTYGYD
PMKQIQVLTPMRKGTVGVANLNIELQKVLNPEDGKKKQKAFRNYVFREGDRVMQIKNNYN
LRWEKINGPGQEGAGVFNGDMGIIVEIDDEEQKIKVLFDDEKLVEYDYTILDELEPAYAV
TIHKSQGSEFPVVILPVFPGPSVLMTRNLLYTAITRARELVILVGNKDCLYGMIMNDRET
KRNSDLAEKLRKCIVGVDWLKQW
NT seq 2232 nt NT seq  +upstreamnt  +downstreamnt
ttggtaactattgaaggtactgttgaagaaattatattctccaatgaagccaatggatat
accgtttgtgagataaaatgcgataaagaagttattaccgtcgtgggatatatgcctttt
atcaatgtgggtgagacgctgagagtttcggggaagtgggtcatccaccctgactatggc
gagcagctcaaagtggagctgtatgaaaagctgcttccggaaacgccggaggctatagaa
aggtatcttgcgtcagggcttatcaagggagtcggccctgcaaccgcaaaaaagattgta
aagaaattcgcagaccaaactcttcatattataagtcatcacccgcagaggcttgccgag
ataaaaggtattaccatggaaaaggctttgagaataggacaggcctttgaggagcaaaga
ggccttcgggatgttgtgctgtttctgcaggagtatggcataagtccgacttattgtgcc
aaaatatacaagactttcggaccggataccatagaagaaatcaggaaaaacccttaccgg
ctttcagacgagattttcggaataagtttcagaacggctgaccggatagccaaaagcctt
ggaatagacccttactcaaaatacaggatttcaagcggtatcaaatatgtgttaagccgg
gccgcgacagaaggtcatacttttttggaagaagagatgctaaaaagttatacgtcaaaa
cttttggacatcaacattgacagcattgaagacgctctcgtttcccttgtgctgaataag
tcggtgtatgtggacagaaatgacgggatgtcaaagatatatttgagttcattttaccat
gcggagctgggagtatgcagaaagctggtggaactttcccaggtaaggtatagcgccgat
atggaggactttgaggaaaggataaagcaggttcagaaaaaagagggtataatacttgcg
gacaagcaaaaggaagccatcagggaagcaatgactaacggcgtgcttgtcataaccgga
gggccgggcacaggcaagacaaccataatcaaaagcattataagccttcttgaaagtgaa
ggatatgagtttgcccttgcagctcccaccggcagggcggcaaagaggatgtccgaggct
acgggctatgaggcaaaaaccattcacaggctccttgagattggttatacctcaaatgag
gacgagcttgtgtttatgaggacggaagacaatcccatagaggctgatgtggtgataatt
gacgagatgtccatggtggatataattctcatgtaccacctgcttaaagctattgtctgc
ggaacaaggcttatactggtcggagatgtggatcagcttccttcggtggggccgggaaat
gtcctcagggatataataaaaagtgggatgatcaagaccgtaaagttgtctgaaatattc
cggcaggccggagagagtatgatagttgtcaatgcccacaggataaaccgcggagagcat
cctatattaaatgagagggaaaaagattttttctttgtgacaagaaattcccagaatgat
attttaaaaaccgtggttgatctttgtacaagaagaatacccgatacttacggatatgat
cccatgaaacagatacaggtattgacgcctatgagaaagggtacggtgggagtggcaaac
ctcaatattgagcttcagaaggttttaaatcccgaagacggaaaaaagaaacaaaaagcc
ttcagaaactatgtattccgtgagggagaccgggtgatgcagataaaaaacaactacaac
ctcagatgggaaaaaatcaacggcccgggccaggaaggagcgggtgtgtttaacggcgat
atgggaattatagttgaaatagatgatgaagagcaaaaaataaaggttttgtttgacgat
gaaaagcttgtggaatatgattacactattttggacgagcttgagccggcctatgccgtt
accattcacaaaagccagggaagtgagtttcccgtggtgatacttccggtgtttcccggg
ccttcggtgcttatgaccagaaatcttttgtacactgcgataacaagggcgagggagctg
gtgatactggtgggcaataaagattgtctttacgggatgattatgaacgatcgggagacc
aaaagaaactcggatttggctgaaaaacttagaaaatgcatagtgggagtggactggttg
aaacaatggtaa

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