KEGG   Campylobacter ureolyticus: CUREO_0171
Entry
CUREO_0171        CDS       T04021                                 
Symbol
rho
Name
(GenBank) transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
cure  Campylobacter ureolyticus
Pathway
cure03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cure00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CUREO_0171 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cure03021]
    CUREO_0171 (rho)
   03019 Messenger RNA biogenesis [BR:cure03019]
    CUREO_0171 (rho)
Transcription machinery [BR:cure03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CUREO_0171 (rho)
Messenger RNA biogenesis [BR:cure03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CUREO_0171 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 ATPase_2 Spore_III_AA Mor AAA_22 HHH_4
Other DBs
NCBI-ProteinID: AKT90053
UniProt: A0A0K1HDH9
Position
172704..174074
AA seq 456 aa
MQTSIILKIYINLYSDFKEGQMENNTNNKKQHTRTHIPVDGHKIEDLRIMDIESLAQMAT
EMGIENPREFRKQELIFEILKTQTKQGGFILFTGILEITSEGYGFLRGIDANLSDSVNDA
YVSLSQIRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYKTIAEARQRPLFDNLTPL
FPTKQLKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPKSGKTELMKELAHGIAKNHPEV
ELLVLLVDERPEEVTDMQRSVKGEVFSSTFDEPAINHVRVSELVIEKAKRAVEMGKDVVI
LLDSITRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIVATALID
TGSKMDEVIFEEFKGTGNSEILLDRNISERRIYPAINILKSSTRKEELLQTPDMLQKVWA
LRSAIGTMDDVEALKFLYSKMLTTKNNEELLSIMNE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgcaaacttcaattatattgaaaatctacataaatttatattctgattttaaagaagga
cagatggaaaataatactaataataaaaaacagcacacgcgaacacatatacctgttgat
gggcataaaatagaagatttaaggataatggatattgagtctttggctcaaatggcaact
gaaatgggtatagaaaatccaagagaatttagaaaacaagaacttatttttgaaatttta
aaaacacaaacaaagcagggtggatttattttatttactggaattttggaaattacaagt
gaaggatatggctttttaagaggaattgatgcaaatttaagtgatagtgtaaatgatgcg
tatgtaagtcttagccagattagaaaatttgctcttcgtgttggggatatcgtaacaggt
caggttagagagccaaaagatcaagaaaaatattacgcacttctaaaaatagaagcgata
aattataaaacaatagcagaagctaggcaaagaccactttttgataacttaaccccactt
tttccaacaaagcagcttaaactagaatatgatgcaatgaaactaactggaagagtgctt
gatctttttacaccaattggaaaaggtcaaagaggacttatagtagctccaccaaaaagt
ggtaaaactgagcttatgaaagaacttgctcatggaattgctaaaaatcatcctgaggtt
gagcttttggtgttgttagttgatgaaagaccagaagaagttactgatatgcaacgctca
gtaaaaggtgaagtatttagctcaacattcgatgagccggcaataaatcatgtaagagtt
agtgagcttgttatagaaaaggccaaaagagctgttgaaatgggaaaagatgttgtaatt
ttgcttgatagtataactcgtcttgcaagggcttataacacagttactccaagtagtggg
aaagtattaagtggtggtgttgatgcaaatgcacttcacaaaccaaaaagattttttgga
gcagctagaaatatagaagagggtggaagtcttacaatagtagcaactgccttaattgat
actggttcaaaaatggatgaggttatatttgaagagtttaagggaactggaaatagtgaa
attctccttgatagaaatataagcgaaagaagaatttacccagcaattaatatcctaaaa
tcaagcactagaaaagaagaacttttacaaactcctgatatgcttcaaaaagtttgggct
ttgcgttctgcaattggaacaatggatgatgtagaagctcttaaatttctatattcaaaa
atgcttacaactaaaaacaatgaagaacttttatctataatgaatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system