KEGG   Chlorella variabilis: CHLNCDRAFT_139551
Entry
CHLNCDRAFT_139551 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
cvr  Chlorella variabilis
Pathway
cvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLNCDRAFT_139551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_139551
Enzymes [BR:cvr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CHLNCDRAFT_139551
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     CHLNCDRAFT_139551
SSDB
Motif
Pfam: R3H DEAD Ank_2 Ank Ank_3 Ank_4 ATPase nSTAND3 AAA_19 AAA_22 AAA_23 Sigma54_activat PhoH AAA_16
Other DBs
NCBI-GeneID: 17351353
NCBI-ProteinID: XP_005844111
JGI: ChlNC64A_1_139551
UniProt: E1ZQE2
Position
Unknown
AA seq 731 aa
MSGRGGPGDGRGGGRGRGRLRPGLRPVAENTRLSITEQLELFQRSDATGELPGSASGRQQ
AGTEYAFPPGLSNHDRAVVHAECKKYGFTSKSHGKNESRCVCVYKRQQRRGGDPAFELPL
GPQSLAALEAYFHAHPPSQAELAGIAGQGRDVDLQDSYGTGEAGSSSEDEAEEEAAAEGD
AVEAAAAGAQAGADGQQQQQQAEAGGRKKGRGGGGAKQHAAAFSEAESLIAGREALPIAS
FREQIVSALDSSQVVLIAGETGCGKTTQVPQYILEDAWYRGKGCRVVCTQPRRISAVSVA
ERVAAERGEGVGDNVGYTIRLESRGGPASSLMFCTNGVLLRMLTAGARGGGGGGGGPARD
PLASVTHLVVDEIHERDRFADFLLILVRDLLPAHPHLRVVLMSATLHIDLFSGYFGGCPV
VRVPGFTHPVEDFYLESILALTGYQEAAVRQVGGLTGGTGASRATAPPPASLPAKERRRI
EEAIEAAFTTGTDEAFEALLEVTGAAGADDMSQGAPGVNVKHTAKGATALMAAAVHGRAD
VVSALLSNGADPSVALPGAGAQTARDLAALYGHGAVVEVLDEFGEGAAAAEELANAALAL
SHYQAQTNADEVDVDLIHLLLMYACQEGVFKKTDAEAAAAAAAGPQVLGAVLVFLPGWDE
IMRLKEKLESSPAFGSSRYQLLPLHSMVAPAEQRRVFVRPPAGVRKIVLATNIAPVVAPH
HTTPQPCLTPP
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgtctggcagaggcggacctggggatggcaggggaggtggcaggggccgcggcaggctg
cgcccaggcctgcgcccagttgcagagaacacccggctgtctattaccgagcagctggag
ctgttccagcgctcggacgccacaggcgagttgccagggagcgcctcagggcgccagcag
gccggcaccgagtatgccttcccgccaggcctgtccaaccacgatcgtgcggtggtgcac
gccgaatgcaagaagtacggcttcaccagcaaatcgcacggcaagaacgagtcgcgctgc
gtgtgcgtgtacaagcggcagcagcggcgcggcggcgacccggcgtttgagctgccgctg
gggccgcagtcgcttgcggccctggaagcctacttccacgcgcacccgccctcgcaggcg
gagctggccggcattgcggggcaggggcgggacgtggatctgcaggattcgtacggcaca
ggggaggccggcagcagcagcgaggatgaggcggaggaggaggcggcggcagagggcgac
gcagtagaagcagcggcagctggtgctcaggcaggcgccgacggccagcagcagcagcag
caggcggaggcaggcgggcgcaagaaggggcgcggcggcggcggcgccaagcagcacgcc
gcggcgtttagtgaggcggagagcctgatcgcggggcgtgaggcgctacccatcgcctcc
ttccgcgaacagattgtgtcggcgctggacagcagccaggtggtgctgattgcgggggag
acggggtgcggcaagaccacgcaggtaccacagtacatcctggaggatgcgtggtaccgc
ggcaagggctgccgcgtggtgtgcacccagccccgccgcatctcagccgtatcggtggct
gagcgcgtggcggcggagcgcggcgagggcgtgggcgacaacgtgggctacaccatccgc
ctggagtcgcgcggcggccccgcctcctccctcatgttctgcaccaacggcgtcctgctg
cgcatgctgaccgcgggcgcgcgtggcggcggcggcggcggcggcggtcccgcgcgggac
cccctggcctccgtcactcacctggtggtggacgagatccacgagcgggaccgcttcgcc
gacttcctgctcatcctggtgcgcgacctgctgcccgcgcacccccacctgcgcgtggtg
ctcatgtccgccaccctgcacatcgacctgttctctggctactttggggggtgcccggtg
gtgcgcgtgcctgggttcacacacccagtggaggacttttatctggagagtatcctggcg
ctgacgggataccaggaggcggcggtacggcaggtgggcggcctgacgggcggcaccggc
gccagccgcgccaccgcgccgccgccggccagcctgcccgccaaggagcggcggcggatc
gaggaggcgatcgaggcggccttcacgacaggcacagacgaggcgtttgaggctctgctg
gaggtgacaggggcggctggcgcggacgacatgtcgcagggggcgcccggcgtcaatgtg
aagcacacggccaagggcgccaccgcgctcatggcggccgcggtgcacggccgcgccgac
gtcgtgtctgccctgctgtcaaacggggccgacccctcggtggcgctgcccggcgccggt
gcccagacggcgcgcgacctggctgcgctgtacgggcacggcgcggtggtggaggtgctg
gatgagtttggggagggggcggcagccgccgaggagctggccaacgcggcgctggcgctg
agccactaccaggcgcagaccaatgcggatgaggtggatgtggacctcatccacctcctt
ctcatgtacgcctgccaggagggcgtgttcaagaagacggatgcagaggcggctgctgcc
gcggcggcggggccgcaggtgctgggcgcggtgcttgtgttcctgcccggctgggacgag
atcatgcggctcaaggagaagctggagagcagccccgcctttgggagcagcaggtaccag
ctgctgccgctgcactccatggtggcccccgcggagcagcgccgcgtgtttgtgcggccg
cccgccggcgtgcgcaagattgtgctggcaaccaacatagcaccagtcgtggcgccacac
cacaccacaccacaaccctgcctcacgcccccttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (60)   

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