KEGG T01153: Cwoe

Conexibacter woesei: Cwoe_5408

Entry

Cwoe_5408 CDS T01153

Definition

helicase, RecD/TraA family

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cwo Conexibacter woesei

Pathway

cwo03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cwo03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 AAA_19 UvrD_C_2 AAA_11 Viral_helicase1 PIF1 AAA_28 AAA_22 PhoH Helicase_RecD HHH_5 DUF2075 Flavi_DEAD

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

5783062..5785287

AA seq 741 aa
MAPQLATWPPADGAAFAGEVVVKGQRFANEESGFAVLDGEWDGERIALVGPLVHLEQGER
AAVAGTWVIDPRYGPQVRVREAHPVALADDAAVLAYLRRVRHVGPRRAAALQQAFGAEVL
NAIDEDPRGAFTRAGLTPQRATEATRSWDALRATRGLHLLLAPHGLAHLASRIHQHYGDR
AHRVVRERPYDLTSVFGVGFVTADAIAHGLGAPLESPARTRAAILHALGEGERDGSTCQP
AAALLLRTRELLSAQAPPPAAFLAELEEGGDVETEQDDEAVWVYRAETARLERELAERVT
ALLDGDGSDKLSDPVEPPDAGADGVELTAEQWAGVRGAFVHRLSVVTGGPGTGKTASIRM
IGQIARDQRARTMLVAPTGRAALRMTEATGLDASTVHSALGWIPGEGPVHDEDTPLRCDL
VIVDETSMANLELLVTLLRAIGPGTHVVLVGDADQLAPVGAGKPFAELVASGRVPTARLQ
HIFRQAAGSMIVQGAHAIRVGNPPSFVRAEEMRHDLFFIARPDPVAAREEIVSLVSERLP
QHYGVDPNADIQVFAPIYRGELGIDALNRSLRAALNPAGREIGNGRLRVGDKLMLVGRNL
HELGVMNGTLLRLLDEVGGGSSEDEDARDARGAREAGGVLVGVDGGAVVQIPATEVGQLQ
LAYACSVHRGQGIELPIAIVVAHPAAGGRFLRREMLYTAITRSTVATVIVGTPDMVARAA
RTTDAGRRHSRLAQRLDALHA

NT seq 2226 nt +upstreamnt +downstreamnt
atggctccgcagctcgccacctggccgcccgccgacggcgccgcgttcgccggcgaggtc
gtcgtcaagggccagcgcttcgcgaacgaggagagcggcttcgccgtcctcgacggcgaa
tgggacggcgagcggatcgcgctcgtcgggccgctcgtccacttggagcagggtgagcgt
gccgccgtcgccggcacgtgggtgatcgacccgcgctacggcccgcaggtgagagtccgc
gaggcgcatcccgtcgcgctcgcggacgacgccgccgtgctcgcctacctgcgcagagtc
cgccacgtcggcccgcgccgcgcggccgcgctccagcaggcgttcggcgccgaggtgctg
aacgcgatcgacgaggacccgcgcggcgccttcacgcgcgcagggctcacgccccagcgt
gccaccgaggcgacgcgctcgtgggacgcgctgcgcgcgacgcgcggactgcacctgctg
ctggcgccgcacgggctcgcccatctcgcgagcaggatccaccagcactacggcgaccgc
gcccaccgcgtcgtgcgcgagcggccgtacgacctgacgagcgtcttcggggtcggcttc
gtcaccgccgacgcgatcgcgcacggcctcggcgcgccgctggagagcccggcgcgcacg
cgcgcggcgatcctgcacgcgctcggcgagggcgagcgggacggctccacctgccagccg
gcggccgcgctgctgctgcgcacgcgcgagctgctgagcgcgcaggcgccgcccccggcg
gcgttcctcgccgagctggaggagggcggcgacgtcgagaccgagcaggacgacgaggcg
gtgtgggtctatcgcgccgagacggcgcgactggagcgcgagctggccgaacgcgtgacg
gcactgctcgacggcgacggctcggacaagctgagcgacccggtcgagccgcccgacgcg
ggtgccgacggcgtcgagctgaccgctgagcagtgggcgggcgtgcgcggcgcgttcgtc
caccggctgtcggtcgtcacgggcgggccgggcaccggcaagacggcgagcatccgcatg
atcggccagatcgcgcgcgaccagcgagcgcgcacgatgctcgtcgcgccgaccggacgc
gccgcgctgcggatgaccgaggcgacggggctcgacgcctcgaccgtccactcggcgctc
ggatggatccccggcgaaggccccgtgcacgacgaggacacgccgctgagatgcgacctc
gtgatcgtcgacgagacgtcgatggcgaacctcgagctgctcgtgacgctgctgcgcgcg
atcggcccggggacgcacgtcgtgctcgtcggcgacgccgatcagctcgcgcccgtcggc
gccggcaagccgttcgccgagctggtcgcctccggacgggtgccgaccgcgcggctgcag
cacatcttccgccaggcggccggttcgatgatcgtccagggcgcgcacgcgatccgcgtc
ggcaacccgccgtcgttcgtgcgcgcggaggagatgcgccatgacctcttcttcatcgcg
cggccggatccggtggcggcacgcgaggagatcgtctcgctcgtgagcgagcggctgccg
cagcactacggcgtcgacccgaacgccgacatccaggtgttcgcgccgatctaccgcggc
gagctggggatcgacgcgctcaacagatcgctgcgggcggcgctcaacccggcggggcgc
gagatcggcaacggccgcctgcgggtcggcgacaagctgatgctcgtcggccgcaacctg
cacgagctgggcgtgatgaacgggacgctgctgcggctgctggacgaagtcgggggcgga
tcgtcggaggacgaggacgccagagacgcgagaggcgcgagagaggccgggggcgtgctc
gtcggcgtcgacggcggcgcggtcgttcagatccccgcgaccgaggtcggccagctgcag
ctcgcctacgcctgctcggtccaccgcgggcaggggatcgagctgccgatcgcgatcgtc
gtcgcgcacccggcggcgggtggccgcttcctgcgccgcgagatgctctacaccgcgatc
acccgctcgaccgtcgcgacggtgatcgtcggcacgccggacatggtcgcccgcgctgcg
cgcacgaccgacgccggccgccgccacagccgcctcgcgcagcgcctcgacgccctccac
gcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CWO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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