KEGG T00318: CYA

Synechococcus sp. JA-3-3Ab: CYA_0110

Entry

CYA_0110 CDS T00318

Gene name

ddlB

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

cya Synechococcus sp. JA-3-3Ab

Pathway

cya00473	D-Alanine metabolism
cya00550	Peptidoglycan biosynthesis
cya01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:cya00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:cya00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 RimK ATPgrasp_Ter ATP-grasp_3 CPSase_L_D2 TTL ATP-grasp GARS_A ATPgrasp_YheCD

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

CyanoBase:

CYORF:

UniProt:

Position

105410..106381

AA seq 323 aa
MNIVILAGGRSAERQVSLVTGKACKRALEDLGHRAKLIDPEEDLPLRLWQERQAGCDFVW
IALHGPGGEDGVVQGMLEWLGLPYQGSGPLASALAMDKLVSKQIFRAEGIPTPEWLVWDE
AQPLSWAECVARLGSPLVVKPSNSGSTVGISLARDEVSLAQGLALASSVSSRVFLERYIP
GKEITLSILSGQVLPAIEIIPAQGDFYDYEAKYAPGGSRHLIPCSLSAAGLARCEAAGLR
AYRVLGCEGLARVDLRVDADENPWVLEVNTLPGMTPTSLCPEAAAALGWTFTELVERMLQ
DALQRAALTRSAPSGSRPSPQPA

NT seq 972 nt +upstreamnt +downstreamnt
atgaacattgttatcttggcagggggtcgttcggcagaacgtcaggtttctttggtaacg
ggcaaagcctgtaagcgggcgctggaggatctggggcatcgggcgaagttgatcgacccc
gaggaggatctgccgctgcgcctttggcaggaacggcaggcaggctgcgacttcgtctgg
attgccctgcatggccccggcggtgaggatggggtggtgcaggggatgctggagtggctg
ggcttgccctatcagggatccgggccgttggccagcgctctggccatggacaagctggtc
tccaagcagatctttcgggccgaagggattcccactcctgagtggctggtctgggatgaa
gcgcagccgctctcctgggccgagtgtgtggcgcgtttgggatccccgctggtggtgaag
cccagcaacagcggctcgacggtggggattagccttgcgcgggatgaggtgtcgttggct
caggggctggcgttggccagctcggtctcctcgcgggtcttcctggagcgctacattccc
ggcaaggagatcaccctctccattctctccggccaggttctcccggccattgagatcatc
cctgcccagggagatttttacgattacgaagccaagtacgcccccggcggctcacggcat
ttgatcccctgttccctcagcgcggcagggctggcccgctgcgaggcggcagggctaagg
gcctatcgggtgttgggatgtgaaggtctggcgcgggtggatctgcgggtggatgccgac
gagaacccttgggtgctggaggtgaacaccctgcccgggatgacccccacttcgctttgc
ccagaggcggcggcagctctgggctggacgtttacggagctggtggagcggatgctgcag
gatgccctgcagagggcggcattgactcgctcggccccgtctggatcccggccttcgcca
cagccggcctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-CYA (1)   
   CYORF-CYA (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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