KEGG T00318: CYA

Synechococcus sp. JA-3-3Ab: CYA_1194

Entry

CYA_1194 CDS T00318

Gene name

rbcL

Definition

ribulose bisophosphate carboxylase (EC:4.1.1.39)

Orthology

K01601

ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]

Organism

cya Synechococcus sp. JA-3-3Ab

Pathway

cya00630	Glyoxylate and dicarboxylate metabolism
cya00710	Carbon fixation in photosynthetic organisms
cya01100	Metabolic pathways
cya01120	Microbial metabolism in diverse environments

Module

cya_M00165	Reductive pentose phosphate cycle (Calvin cycle)
cya_M00166	Reductive pentose phosphate cycle, RuBP + CO2 => glyceraldehyde-3P

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:cya00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:cya00710]

SSDB

Motif

Pfam:

RuBisCO_large RuBisCO_large_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

CyanoBase:

CYORF:

UniProt:

Position

1207204..1208628

AA seq 474 aa
MAYSATQTKKGYQAGVKDYRLTYYTPDYTPKDTDVLACFRVTPQPGVPPEEAGAAVAAES
STGTWTTVWTDLLTDLDRYKGRCYDIEPVPGEENQYFCFVAYPLDLFEEGSVTNMLTSIV
GNVFGFKALKALRLEDVRIPVAYLKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLS
AKNYGRAVYEALRGGLDFTKDDENINSQPFQRWRDRYLFVMEAVHKAQAETGEIKGHYLN
VTAPTCEEMFKRAEFAKEIGAPIIMHDYLTAGFTANTSLAKWCRDNGILLHIHRAMHAVI
DRQKNHGIHFRVLAKCLRMSGGDHLHAGTVVGKLEGDRAITMGFVDLMRENYVEADRSRG
IFFTQDWASMPGVMPVASGGIHVWHMPALVEIFGDDAVLQFGGGTLGHPWGNAPGATANR
VALEACIQARNEGRDLAREGNEIIREAAKWSPELAAACELWKEIKFEFKPVDTL

NT seq 1425 nt +upstreamnt +downstreamnt
gtggcctactcagcaacccaaaccaaaaagggctatcaagccggcgtaaaggattaccga
ctcacgtattacacgcccgattacacgcccaaggataccgacgtcttggcctgtttccgg
gttactcctcagccgggcgttccccccgaagaggccggggcggctgtggcggctgaatct
tcgaccggcacctggacaaccgtgtggacggatctgctcaccgacttggatcggtacaag
ggccgctgctacgacatcgagccggtcccgggcgaagagaatcaatacttctgcttcgtc
gcctacccgctggatctgttcgaggaaggctcggtcaccaacatgctcacctcgattgta
ggcaacgtcttcggcttcaaagccttgaaagcgttgcggctggaggatgtgcggatcccg
gtggcctacctgaagaccttccagggccctccccacggcattcaggtggagcgggacaag
ttgaacaagtacggccgtccgctgctgggctgcaccatcaagcccaagctgggcctttcc
gccaaaaactacggacgggccgtgtacgaggcgctgcggggcgggttggacttcaccaaa
gacgacgaaaacatcaactcccagcccttccagcgctggcgggatcgctacctctttgtg
atggaggctgtccacaaggcgcaggcagagactggcgagatcaaggggcactacctgaac
gtgacggcgcccacctgtgaggagatgttcaagcgggcggagtttgccaaggagatcggt
gcccccatcatcatgcacgattacctgactgccggatttaccgccaacaccagcttggcc
aagtggtgccgcgacaacggcatcctgctgcacattcaccgtgccatgcatgccgtgatt
gaccgccagaaaaaccacggcatccacttccgggtgctggccaagtgcttgcgcatgtcc
ggcggcgaccacctgcatgccggtacggtggtgggcaagttggagggcgaccgcgccatc
accatgggctttgtggatctcatgcgggaaaactacgtggaggccgaccgctcccgcggc
attttcttcacccaagattgggcctccatgcctggggtgatgccggtggcctccggtggc
attcacgtctggcacatgccggcgctggtggagatcttcggcgacgacgcggtgctgcag
tttggtggcggaaccctgggacacccctgggggaacgcgccaggcgccactgccaaccgg
gtggccctagaagcctgtatccaggcccgcaatgagggtcgggatctggcccgtgagggc
aacgagatcatccgcgaagcggccaagtggtcgccggaactggcggctgcctgcgagctg
tggaaggagatcaagttcgagttcaagcccgtcgatacgctctag

All links

Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-CYA (1)   
   CYORF-CYA (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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