KEGG T00318: CYA

Synechococcus sp. JA-3-3Ab: CYA_2199

Entry

CYA_2199          CDS       T00318

Symbol

rrmJ

Name

(GenBank) ribosomal RNA large subunit methytransferase J

K06968

23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]

Organism

cya Synechococcus sp. JA-3-3Ab

Brite

KEGG Orthology (KO) [BR:cya00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cya03009]
    CYA_2199 (rrmJ)
Enzymes [BR:cya01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.186  23S rRNA (cytidine2498-2'-O)-methyltransferase
     CYA_2199 (rrmJ)
Ribosome biogenesis [BR:cya03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CYA_2199 (rrmJ)

SSDB

Motif

Pfam:

FtsJ Methyltransf_23 Methyltransf_24 DREV Borealin THUMP Methyltransf_25

Other DBs

NCBI-ProteinID:

ABD00340

CyanoBase:

CYA_2199

UniProt:

Q2JSM9

Position

complement(2217989..2219059)

AA seq 356 aa
MSRFLPPTTHLWLGSADPDFLDLARREIAAADPEAVFQPLPEAPGLVRVCSQRSFADLAQ
AWQANPPIFLRHICPIHQERQLDEISLLRLDQNLLAAIDPALSFSVQTRRFGKLNVKPFQ
VNAALAEQVMATVGSPLQVKDPQQVISVVLLASSTGLRAWLGLSLAAQNLSTWAGGVHRF
RRDPDQISRAEFKLLEAIQVFRVPLQPGGRALDLGAAPGGWSRILRLHGQQVTAVDPAEL
DERLRHDAGICHHRLSAQAYLARCPGQFHLILNDMRMDGRASAHLMAAFAPHLEPQGAAV
MTLKLPHQHRLRVLRQTLDILGSAFPVVRARHLFHNRSEITLYLQKGIPAPHSSTT

NT seq 1071 nt +upstreamnt +downstreamnt
gtgagcaggtttcttccccccactactcacctgtggctgggcagcgccgaccccgatttt
ctggatctggcgaggcgggaaattgcggcagcggatcccgaggccgtctttcagcctttg
ccggaggcacctggcctagtgcgggtgtgcagccagcgctcgtttgccgaccttgcccag
gcctggcaggctaacccgcccatttttttgcgccacatctgccccatccaccaagagcga
cagctcgacgagatctccctgctgcgcctcgatcaaaacctcttggcggccatcgaccct
gccctcagcttttcggtacagacgcgccggtttggcaagctcaacgtcaagcccttccag
gttaacgcagccctggccgaacaggtgatggcgacggtgggatcccctctgcaggtcaag
gatccccagcaggtgatctcggtggtgctcctggccagctcgacagggctccgggcttgg
ctaggcctgtcgctggcggcgcaaaacctctccacctgggccggcggcgtccaccgcttt
cgccgcgatcccgaccagatcagccgagcggagtttaagctgctggaggccatccaggtg
tttcgcgtccctttgcaaccagggggacgggccttggatctgggggcggcgccggggggc
tggtcgcgcattttgcgcctgcatggccagcaggtgacggctgtggatccggcggagctg
gacgagcgcctccgccacgatgccggcatttgtcaccatcgcctcagcgcccaagcctat
ctggcccgctgtccaggtcagtttcacctcatcctcaacgacatgcgcatggatggccgt
gcctctgcccatctgatggcggcttttgcccctcatctggagccgcagggggcagccgtg
atgaccctaaagctcccccaccagcatcgcctgcgggtgctccgccagaccctagacatc
ttgggcagcgccttcccggtggtgagggcgcgccacctgtttcacaaccgcagcgaaatt
accctctacctgcaaaaagggatcccggcccctcactcttccaccacctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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