KEGG T00319: CYB

Synechococcus sp. JA-2-3B'a(2-13): CYB_1383

Entry

CYB_1383          CDS       T00319

Symbol

serA

Name

(GenBank) D-3-phosphoglycerate dehydrogenase

K00058

D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]

Organism

cyb Synechococcus sp. JA-2-3B'a(2-13)

Pathway

cyb00260

Glycine, serine and threonine metabolism

cyb00270

Cysteine and methionine metabolism

cyb00680

Methane metabolism

cyb01100

Metabolic pathways

cyb01110

Biosynthesis of secondary metabolites

cyb01120

Microbial metabolism in diverse environments

cyb01200

Carbon metabolism

cyb01230

Biosynthesis of amino acids

Brite

KEGG Orthology (KO) [BR:cyb00001]
09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    CYB_1383 (serA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CYB_1383 (serA)
   00270 Cysteine and methionine metabolism
    CYB_1383 (serA)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cyb04147]
    CYB_1383 (serA)
Enzymes [BR:cyb01000]
1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     CYB_1383 (serA)
    1.1.1.399  2-oxoglutarate reductase
     CYB_1383 (serA)
Exosome [BR:cyb04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CYB_1383 (serA)

SSDB

Motif

Pfam:

2-Hacid_dh_C 2-Hacid_dh PGDH_inter ACT NAD_binding_2 IlvN DUF5130 XdhC_C

Other DBs

NCBI-ProteinID:

ABD02351

CyanoBase:

CYB_1383

UniProt:

Q2JLQ3

Position

complement(1454116..1455696)

AA seq 526 aa
MPRVIVTDPIDQAGIDILSQVAQVDVQTQLTPEQLIAVIPNYDAIMVRSGTRVTREVIEA
GTNLKIIGRAGVGVDNIDVPAATKAGILVVNSPEGNTIAAAEHAIALMMALSRHIPDANA
SLKSGLWNRQEFVGVEVYKKTLGIVGLGRIGSHVAQIAKAMGMKLLAYDPYLSVERAEQL
GVRLVDFTTLVQESDYITLHIPKTPETTNLFNAETFRMMKPTARLINCARGGLVDEQALY
EALKSGQIAGAALDVFANEPLKDSPLFSLGKEVLLTPHLGASTEEAQVNVAIDVAEQIRD
VLLGLPARSAVNIPGLQAEVLQNLRPYLDLAETLGNLVGQLAGDRVNQLEIRLQGDLAEK
DGQPIVIAALKGLLTLALRERVNYVNASIEAKERGIRVVETRDPSLKDYSGSLTLIAHGP
NGIRSVSGALIGEREVRITQIDEFPVNVPPSANMLMTLHRDMPGIIGRIGTLLGAYNVNI
ASMQVGRKIIRGDAVMVLSLDDPLPDGILEEVLKQPGIRDAFVVNL

NT seq 1581 nt +upstreamnt +downstreamnt
atgcccagagtcatcgtcacagatcccatcgatcaggcggggatcgacattctctcccaa
gtcgctcaggtggatgtgcaaacccagctcaccccagagcagttgatcgcggtcatcccc
aactacgatgccatcatggtgcgctccggtacacgggttacccgagaggtaatcgaggcg
gggacgaacttaaaaatcatcgggcgggcgggcgttggtgtcgataacatcgatgtgcct
gccgcaaccaaagccgggatcctggtggtcaactccccagagggcaacaccattgccgct
gccgagcacgccattgccttgatgatggccctctcccgccacatacccgatgccaatgcc
tctctgaagtcgggcctgtggaatcggcaagagtttgtcggcgtagaagtctacaaaaaa
acgctggggattgtcggattgggtcggattggatcccatgtggcccagattgccaaggcg
atggggatgaagctgctggcctatgacccctatctatccgtggagcgggccgagcaactg
ggggtacgcctggtggacttcacaactttggtccaggaatccgactacatcaccttgcac
attcccaaaacccctgaaaccaccaacctgttcaacgccgaaacctttcgcatgatgaag
ccgaccgctcgcctgatcaactgcgcccgcggcggtttggtggatgaacaagccctgtac
gaagccctgaaatccggccaaattgccggagcggctttggatgtatttgccaatgagccc
ctgaaggactccccgctgttttccctgggcaaagaagtcctgctcactccccacttgggg
gcctccaccgaagaagcccaagtgaatgtggccattgatgtggccgagcagatccgcgat
gtgttgctggggctgccggcccgctctgccgtgaacatccccggcctacaggcagaggtg
ctgcaaaacctcagaccctacctggacttggccgaaaccctaggcaacttggttggccaa
ttggcgggggatcgcgtcaaccagttggagatccgcctgcagggagatctggcggaaaaa
gatgggcagccgatcgtcattgccgctctcaaagggcttttgacgctggcgctgcgggag
cgggtcaactacgtcaacgcctccatcgaggccaaagaacggggcattcgggtggtggaa
actcgagatccctctttgaaagattattccggatccctgacgttgattgcccacggcccc
aatgggatccgctcggtttcgggggcgttgattggggagcgagaggtgcggattacccag
atcgacgagttcccggtgaatgtgcccccttccgccaacatgctgatgaccctgcaccgg
gatatgccgggaatcatcggacggattggcaccttgctgggagcctacaatgtcaacatc
gccagcatgcaggtggggcgcaagatcatccgcggcgatgcagtcatggtgctcagcttg
gacgatcccctgccggatgggatcctggaagaggtgctcaagcagccgggcatccgtgac
gcttttgtagtgaacctctag

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