KEGG   Cycloclasticus sp. P1: Q91_0956
Entry
Q91_0956          CDS       T02265                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cyq  Cycloclasticus sp. P1
Pathway
cyq03030  DNA replication
cyq03430  Mismatch repair
cyq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q91_0956
   03430 Mismatch repair
    Q91_0956
   03440 Homologous recombination
    Q91_0956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cyq03032]
    Q91_0956
   03400 DNA repair and recombination proteins [BR:cyq03400]
    Q91_0956
Enzymes [BR:cyq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q91_0956
DNA replication proteins [BR:cyq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q91_0956
DNA repair and recombination proteins [BR:cyq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q91_0956
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: AFT66994
UniProt: K0C120
Position
1009501..1010214
AA seq 237 aa
MRQIILDTETTGLEPKQGHRIIEVGCVELVNRRLTGNNFHYYLNPQRDIDEGAVEVHGLT
AEFLADKPLYENIAEELFEYLKGAEVIIHNAAFDVGFINHEYSLMGSDHTDMASWCEVTD
SLHMARKMFPGQRNSLDALCKRFEIDNSQRTLHGALLDAEILADVYLMMTGGQNSLFADE
HQTDTVFEPKMLDKNRQLLPVIKASSDELEKHAERIEMINKASGGQCVWDKIKQTAQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagacaaattattttagatactgaaaccactgggcttgagccaaaacaggggcaccgt
attatcgaggtaggatgcgttgagttggttaatagacgtttaacagggaacaacttccat
tattacttgaatccgcagcgagatattgatgaaggggctgttgaggtgcatggtttaaca
gctgagtttttagcggataaaccgttatatgagaatattgcagaagaacttttcgagtat
ctaaaaggagccgaagtgattattcacaacgcggcatttgacgttggctttattaatcat
gaatacagtttgatgggttcggatcatacagatatggcatcgtggtgtgaggtgacagac
tctctgcatatggctagaaagatgtttcctggccaacgcaatagcttagatgcgctttgc
aagcgctttgagatagacaatagccaacgaacgttgcatggcgctttgttagatgctgag
attctagccgatgtgtatttgatgatgaccggtgggcagaactccctgtttgctgatgag
catcaaacggatactgtatttgagcctaaaatgttagataagaatcgccagcttttacca
gttattaaggcgagcagtgacgagttagaaaagcacgctgagcgaattgaaatgattaat
aaggcgtccggtggccaatgtgtttgggataaaattaaacaaactgctcagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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