KEGG   Crocosphaera subtropica: cce_2425
Entry
cce_2425          CDS       T00686                                 
Symbol
recJ2
Name
(GenBank) single-strand-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyt  Crocosphaera subtropica
Pathway
cyt03410  Base excision repair
cyt03430  Mismatch repair
cyt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    cce_2425 (recJ2)
   03430 Mismatch repair
    cce_2425 (recJ2)
   03440 Homologous recombination
    cce_2425 (recJ2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyt03400]
    cce_2425 (recJ2)
DNA repair and recombination proteins [BR:cyt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     cce_2425 (recJ2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     cce_2425 (recJ2)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      cce_2425 (recJ2)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB HTH_11 DUF5771 DUF1963
Other DBs
NCBI-ProteinID: ACB51773
CyanoBase: cce_2425
UniProt: B1WRC4
Position
2477063..2479408
AA seq 781 aa
MNTIHSQWEVLPIVSLPAWFLDIVNSYCTDSQGIYAAQLLWHRGIQTPEELQGFLDANYY
YPLSPFEFGCEMKLATKRLEVAMNNQEKVTIWGDFDADGITATSVLWEGLGQFFIPHLQL
NYYIPNRATESHGLNIPGIKKLADEGTKLIVTCDTGSTNIEEINYANSLEIDIIVTDHHT
LPNDRPNVVSIINPRYFYEDHPLFSLSGVAVAYKLVEALYLSFPEIPESPLENLLDLVAI
GLIADLVELKGDCRYLAQQGLKKLQQQLKNTTRPGVAHLLNLCKRGGDRPTDISFGIGPR
INAISRIQGDAHFAVELLTSKDEERCKELAFETELANTRRKSLQKDIKKNVEKKLQMLDL
STTQVIVLEDPQWQSGVLGLVAGQIAQEYGRPTILLTTAETEKMSESDLKLARGSARSVY
NIDLYKLVASQRDLLHKFGGHPFAAGLSLPVENLSLFRENINRKLRQEIIDLNTLSSTIQ
ADLVVTVSQLGQSLFRELKLLEPYGMGNPVPRLLIQNCWFEALGNQNIRDAKNNKIKYIK
TKFDIYDNSVDEGFPGIWWEHYQEELPQGKNKRCDAIVELDYNTYGKGRYEVRLIEVRES
LKTHEYQSIKTNQITLIDYRNQDQVNESYLELEQLSSCPVSWDELYKKYQTSINNQHDLA
LNYSYDEQFNPSEMIKQLIGIAKYLNRTQKTITKEQLKEKLLLSDRTLNLALEFLEKIGF
LIIQEDQTIQIETTTHLSQEYYLSQKKLIDTLQEEHFKRKYFTQVPVETLQQLLVSESLN
Y
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgaatactatacactctcagtgggaagttttaccgattgtttctttacctgcttggttt
ctggatattgttaatagttattgtactgattctcagggaatttatgcagcccaattatta
tggcatagaggaattcaaactccagaagaattacaaggttttttagatgcgaactattat
tatccgttgagtccttttgaatttggttgtgaaatgaaattagcaactaaacgcctagaa
gttgctatgaataatcaagaaaaagtaactatttggggagatttcgatgcggatggaatt
acagccaccagtgttttatgggaaggacttggacaattttttattcctcatctccaactt
aattattatataccgaatcgtgccacagagtctcatggattaaatattccaggcattaaa
aagttagcagacgaagggacaaaactgattgtaacctgtgacacaggaagcactaatata
gaggaaattaattatgctaattctctagagattgatattattgttactgatcatcatacc
ttacccaatgatcggcctaatgtggtttctattattaatcctcgttatttttatgaagat
catccattattttctttatcaggagttgccgtagcttataaattagttgaagccttatat
ttaagctttccagaaattcccgaaagtcctttagaaaatttattagatttagtggcgatt
ggtttaattgctgatttagttgaattaaaaggagactgtcgttatttagcacagcaaggg
ttaaaaaagctccagcaacaacttaaaaataccacccgtcctggcgttgctcatttacta
aatttatgcaagagaggaggcgatcgcccgacggatatttctttcggtattggtcctaga
attaatgccattagtcgtatacaaggggatgctcattttgctgtagaattattaaccagt
aaagatgaagaacgttgtaaggaactggcttttgagacggaattagccaatacccgtcgt
aagtctttacagaaagatattaagaaaaatgttgagaaaaaactacaaatgttagactta
tctaccactcaagttattgttttagaagatccgcaatggcaaagtggtgtattaggatta
gttgcgggccaaattgctcaagagtacggtcgtccgactattttattgacaacggctgaa
accgaaaaaatgagtgaaagtgatctaaaactagctagagggtcagcccgttcggtttat
aatattgatctgtataagttagtcgcttctcaacgagatttattacataaattcggaggt
catccctttgcagcagggttgagtttaccggtagaaaatttatctttgttcagagaaaat
atcaatcgaaagctgagacaagaaattatagaccttaatacattaagttctaccattcaa
gctgatttagtcgtcacagtttctcaactgggtcaaagtttatttagagaattaaaatta
ttagaaccctatggaatgggaaatcctgtccctaggttattgattcaaaattgttggttt
gaagcgttagggaatcaaaatattagagatgctaaaaataataaaattaaatacataaaa
actaagtttgatatttatgataattccgttgatgaggggtttcctggtatttggtgggaa
cattatcaagaagaattaccccaaggcaaaaataagcgatgtgatgctatagttgaactg
gattataatacctatggaaagggacgttatgaagtgcgtttaattgaagttagagaaagt
ttaaagactcacgaatatcaatcaataaaaaccaatcaaattactttgatcgattataga
aatcaagatcaagttaatgagagttatttagaattagaacaattaagtagttgtcctgtg
agttgggatgaattatataaaaagtaccaaacaagtattaataatcaacatgatttagcg
ttgaactactcctatgatgagcaatttaatccatcagaaatgattaaacaattaatcggt
attgctaaatatctgaaccgaactcagaaaacgataacaaaagaacaattaaaagaaaaa
ttattattaagcgatcgcaccctaaatttagccttggaatttttagagaaaattgggttt
ttaatcatccaagaggatcaaactattcagatcgaaacaacaacccatttatcacaagag
tattacctctcacagaaaaaattaatagatactctccaagaagaacattttaaaagaaaa
tactttactcaagttcctgtcgaaaccttacaacagttattagtgtctgaaagtttaaat
tattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system