KEGG   Desulfocurvibacter africanus subsp. africanus: Desaf_2888
Entry
Desaf_2888        CDS       T01662                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
daf  Desulfocurvibacter africanus subsp. africanus
Pathway
daf03030  DNA replication
daf03430  Mismatch repair
daf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:daf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Desaf_2888
   03430 Mismatch repair
    Desaf_2888
   03440 Homologous recombination
    Desaf_2888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daf03032]
    Desaf_2888
   03400 DNA repair and recombination proteins [BR:daf03400]
    Desaf_2888
Enzymes [BR:daf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Desaf_2888
DNA replication proteins [BR:daf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Desaf_2888
DNA repair and recombination proteins [BR:daf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Desaf_2888
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_30 AAA_16 AAA_5 TIP49 AAA_14 AAA_18 AAA_19 AAA_28 TsaE AAA_2 DUF3646 Rad17 PIF1 nSTAND3 NACHT SKI
Other DBs
NCBI-ProteinID: EGJ51200
UniProt: F3Z1R5
Position
3188784..3190601
AA seq 605 aa
MSSAHLTAKYRPQCFAEVAGQEALKAVLSRAAKEDRIAPAYLFSGTRGVGKTTLARILAK
AVNCEHAPTAEPCNQCRHCRQITAGAAVDVVEIDAASNRGIDDARRLKEDIGYAPLECRY
KVFIIDEAHMLTREAFNALLKTLEEPPGRVTFILATTEPHKFPATIISRCQHYAFKRLGQ
AELEAHLKVVLGKEGVDCEDAAVSLIARRGAGSVRDSMSLLGQALALGGRQLVAQEVRSL
LGLAGQDVFLAVMEAIHTGDCIAAGEVIRQVLDQGLDLGFFLRELSSAWRNMFLLKQGGE
RALPLIDLPESEARQWLDWAERFDLGRIHASWQLTLEGQRRVLRSLEPALALELLLFNLC
SLPQLLRLSATCASGGSQAGSPAAPGRPGGQGGQSRSAPAQSRQGFTPPARSGVPGASGA
RQPGPAVQSATHAADGFSNASAGSEEPEGNEPPPAEPPPGHALAVASLDSTETETEPAAS
LAGSLGPRTWEGFLAWVDGRAKETGQAINGARMVPGEVEGDALQLYCRNETHCRLVTQGR
EFSVFKRYVEEYFGPGMRIEATAKRAAPRKSLKELREEIREHPLVKQVVEEFDAQIVDIR
RPEDR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagcagcgcgcatcttacagcaaaatacagaccccaatgcttcgccgaagtagccggc
caggaggcgctcaaggccgtgctttcgcgcgcggccaaggaagaccgcatcgcaccggcc
tacctcttctcaggtacgcgcggcgtgggcaagaccacgctggcgcgcattctggccaaa
gcggtcaactgcgagcatgcgcccacggccgagccatgcaaccagtgccgccattgccgg
cagataaccgcgggcgcggccgtggacgtggtggagatcgacgcggcatccaaccgtggc
atagacgacgcccgccgcctgaaagaggacatcggttacgcaccactggagtgccgctac
aaggtcttcatcatcgacgaagcgcacatgctgaccagggaagccttcaatgcattgctc
aagaccctggaggagccgccgggccgggttacgtttatcctggccaccacggagccgcac
aaattcccggcgaccatcatcagccgctgtcagcattatgccttcaaacgcctgggtcag
gccgaactggaggcgcatctcaaggtcgtgctcggcaaggagggcgttgactgcgaggac
gcggccgtcagcctcatcgccaggcgcggcgcgggcagcgtgcgcgactccatgtcgctc
ctgggccaggctctggccttgggcggccggcagttggtcgcccaagaggtgcgcagcttg
ctgggcctggcgggccaggatgtcttcctggccgtgatggaggccattcataccggagac
tgtatcgccgcaggcgaggtcatccgccaggtgctggaccagggactggaccttggtttc
ttcctgcgcgagctttcctcggcctggcgcaatatgtttctgctcaagcaaggcggcgaa
cgggccttgccgcttatcgacttgcccgagtccgaggccaggcagtggttggattgggcg
gaacgcttcgatctgggccgcatccacgccagctggcagctgaccctggaagggcagcgt
cgtgttttgcgcagtctggagccggctctagccttggagcttttgctgtttaacttatgt
tccttgccgcagcttctgcgcctgtccgctacgtgcgcttcgggcggctcccaggccggc
tctccggctgccccaggccggcctggtgggcagggcggtcagtctcggtccgctcccgcg
caaagccggcagggattcacgccgccggccagatcaggtgtacccggcgcatctggcgca
cgccagcccggccctgcggttcagtccgcaacgcatgctgccgatggcttttccaatgcg
tcggcgggcagcgaagagcccgaaggcaacgagcctccgccggccgagcctccgcctgga
catgcgctcgctgtcgcgtccctggattcgaccgagacagagaccgagcctgccgcgtcg
ttggccggttctctggggccccgcacgtgggaaggcttcctggcctgggtggatggccga
gccaaggagacggggcaggccattaatggcgcgcgtatggtgcctggcgaggtcgaggga
gacgcgctgcaattgtactgccgtaatgaaacgcattgccggcttgttactcaggggcgg
gagttttccgtattcaaacgttatgtcgaggagtatttcggccctggcatgcgcatcgag
gctacggccaagcgtgcggctccgcgcaagagcctcaaggaactgcgcgaggagatcagg
gagcatccattggtaaagcaggttgtggaagagttcgacgcgcagatcgtcgatatccgc
cggcccgaagaccgttaa

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