KEGG   Desulfurivibrio alkaliphilus: DaAHT2_0851
Entry
DaAHT2_0851       CDS       T01244                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
dak  Desulfurivibrio alkaliphilus
Pathway
dak03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DaAHT2_0851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dak03400]
    DaAHT2_0851
DNA repair and recombination proteins [BR:dak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DaAHT2_0851
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 HHH UVR GIY-YIG HHH_2 HHH_8 HHH_3 GIY_YIG_domain
Other DBs
NCBI-ProteinID: ADH85555
UniProt: D6Z1Y0
Position
complement(1018328..1020160)
AA seq 610 aa
MFDPVMIADAADAPGVYLMRDAGGQVLYVGKAVSLRKRLQSYSRIDPAGRSKTSVMLGKV
AKVDTVLTRTEKEALILEAGLIKQHRPRYNVILRDDKSYPHLKVTVQEEWPRLLMTRRVS
KDGARYFGPYASPAAMWETLRLLNSLFPLRRCKAKKFAPGQRACLNHQMGRCPAPCIGAI
TPEAYRQRVSQVLAILEGRKRELTRELTGRMQEAAAGLNFEEAAALRDQIRALNQTLEKQ
VVLGRERVDLDVFGLVRRHGQVAAALLFIREGALADKREFFLAEPVGEDDEVLAELLRRF
YEHPQRPIPRSILLPLPAEGAAALTEWLSEKRGGPVRLLVPRRGDKKALVTMAGDNAGQL
LAAREKQQAGWLSLGEEIRRALRLTSSPQRIECLDISNLGGREAVGSLVSFRQGEKESSR
YRRFHIRNLATPDDYAMMREVLLRHLCRAAAAETLPDLLVLDGGKGQLGVAQAVLAELAL
PGPELVSIAKDREGSGERLFRPGRKNHLKLAQHSPVLLFFMKIRDEAHRFGITFHRRLRR
QKQLVSRLEEIPGVGPGRKQALLKQLGSLAGVAAATPEQLAAVPGIGPELAAVIHRHLQL
PRDGETPAAN
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtttgacccggtgatgatagccgatgcggcggatgctcccggggtctacctgatgcgg
gacgccggcgggcaggtgttgtacgtgggcaaggccgtcagcctgcgcaagcgcctgcag
tcttacagccggatcgatccggcggggcgcagcaagacctcggtgatgctgggcaaagtg
gccaaagtggacaccgtgctcacccgcaccgaaaaggaagccctgatcctggaagccggg
ttgatcaagcagcaccgcccccgttacaacgtaattctccgcgatgacaagagttacccc
catcttaaggtaacggtgcaggaagaatggccccggctgctgatgacccgccgggtgagc
aaagacggcgcccgctacttcggcccctacgcctcgccggcggccatgtgggagaccctg
cgcctgctcaactcactttttcccctgcgccgctgcaaggccaaaaagttcgcccccggc
cagcgggcctgtcttaaccaccaaatggggcggtgccccgctccctgtatcggggccatc
accccggaggcataccggcagcgggtaagtcaggtgctggcgattctggaaggccgcaaa
cgggagctgacccgggagctgaccggtcgcatgcaggaggccgccgccgggttgaacttt
gaggaagctgccgccctgcgggatcaaatccgggcccttaatcagaccctggaaaagcag
gtggtgctgggccgggagcgggtggaccttgatgtgtttggcctggtacgaaggcacggg
caggtggcggcggccctgctgttcatccgggaaggggccctggccgacaaacgggagttt
tttctggccgaaccggtgggggaggatgatgaggtgctggcagaactgctgcgccgcttc
tacgaacatccccagcgaccgattccccggagcatcttgctgcccctgccggccgaaggt
gcggcggcgcttacggaatggttgagtgaaaaacggggcggtccggtgaggttgctggtt
cctcggcggggtgacaaaaaagcgctggtgaccatggccggcgacaatgccggccaactg
ctggcggcccgggaaaagcagcaggccggttggctttccctgggggaagagattcgccgg
gccctgcggctgaccagcagcccccagcggatcgaatgcctggatatttccaacctgggc
ggccgggaggccgtcggctccctggtctctttccggcagggggagaaggaaagctcccgc
taccgccgttttcatatccgtaatcttgccacccccgacgattatgccatgatgcgggag
gtgctgctgcgccatctttgccgtgccgccgcggcagaaaccctgcctgatttgctggtg
ctggatggcggtaaggggcaactcggggtggcccaggcggtgcttgccgagctggcgctg
cccggcccggaactggtttccattgccaaggatcgggaagggtcgggggagcgcctcttt
cggccgggccgaaaaaaccatctgaagctggcccagcactccccggtgttgctttttttt
atgaagatccgggatgaagcacaccgcttcggcatcaccttccaccgccggctgcggcgc
caaaaacagcttgtttccaggctggaagaaattcccggggtggggcccgggcgcaaacag
gccctgcttaaacagctgggcagcctggccggggtcgccgccgccacgccggagcaactg
gccgccgttcccggtatcggcccggagttggcggcggttattcatcggcacctgcagctt
ccccgggatggagaaacgccggcggccaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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