KEGG T00813: Dalk

Desulfatibacillum alkenivorans: Dalk_2849

Entry

Dalk_2849 CDS T00813

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

dal Desulfatibacillum alkenivorans

Pathway

dal03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:dal03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD Viral_helicase1 AAA_11 AAA_22 UvrD-helicase DUF2075 NTPase_1 AAA_28 PIF1 AAA_5 Mg_chelatase AAA_17 AAA_18 AAA_16 AAA_25 AAA NACHT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3667306..3669075

AA seq 589 aa
MIEFEAIDGQFAAFLQKLAGGSDPVLQSAAALVSLKTREGHTCVELNSGLDQDCLLSPDC
PENPAQWIDALANSPVVGAPGEYRPLILDQAGRLYLHRYYEDQALTAKKILEWSVPDPAY
TDQDRLAQELDRLFTPLPNSETDWQKAAAATAVLRKFSVISGGPGTGKTTIAARIIRLLL
SLADGRAPSIAITAPTGKAAARLLESLGKELSRLGVPPGMEDAIPKRAKTIHRLMGARFN
SSQFIHNADNPINADILIVDEASMVELSLMARLLEALPDHGKLILLGDKDQLASVGPGSV
MGDICSGPGSQAFSPEWARVLAKAAGQAIPSENGLAPIADGIVHLVKNYRFAKDSGIGEL
ADCVVRGDAAGAAASLESGGEIIYEPVNNPRTLPALLEEPLREGFLPFITAKNPAQALEA
FGGFRVLCGVRQGPWGMNSANSLVEDIFARDGLILLRNYPWYEKRPVVVNRNDAEMNLFN
GDHGVYMDGKAAFPGLQEELRHYARSMLPAHDTAFAMTVHKSQGSEFESVLLILPGENSP
VLTRELLYTAVTRTRSRLRIVGAMPSIKKAVLSPTRRPSGLQDALWKTE

NT seq 1770 nt +upstreamnt +downstreamnt
atgatcgaattcgaagccatagacggtcaattcgccgcgtttctgcagaagctggcgggc
ggctcagacccggtgctgcaatcggccgcggctctggtttcccttaaaaccagggaaggc
cacacctgcgtggagctgaattccgggctggaccaggactgcctgctcagcccggattgc
ccggaaaatccagcgcaatggattgacgccctggcgaattcgccggtggtcggagcgccc
ggggagtatcggccgctcatcctggatcaggcgggcaggctgtatttgcaccggtattat
gaagatcaggcattgaccgccaaaaaaattctggagtggagcgtcccggacccggcctat
acggaccaggaccggctggctcaggaattggatcgtttgttcacccccttgccgaatagt
gaaaccgactggcagaaggctgcggcggccacggcggttctgcgcaagttttccgtaatt
tccggcgggccggggaccggcaagaccaccatcgccgcccggatcatccgcctgcttctg
tccctggcggacgggcgggcgccctccatcgccatcacagcgcccacgggcaaggccgcg
gcaaggcttttggaatccctgggcaaagaattgagccgcctgggcgttccccctggaatg
gaggacgccattcccaaacgggccaagaccatccatcggctcatgggagcgaggttcaac
tccagtcaatttatccacaatgccgacaatcccatcaacgccgatattttgattgtagac
gaagcctccatggtggagttatccctcatggcccggcttttggaagccctgccggatcac
ggcaagctgattttgcttggggataaagaccagttggcctctgtggggccaggctcggtc
atgggcgatatttgctcaggaccggggtcgcaggctttctcaccggagtgggccagagtt
ttagccaaggccgccggacaggcgattccttcggagaatggcctggcccccatagcggac
gggatcgtgcatcttgtgaaaaactaccggttcgccaaggattcgggcatcggcgaactg
gctgattgcgtggtccggggcgacgccgcaggcgcggccgccagcctggagagcggcggg
gagatcatctacgaacccgtgaacaacccgcgcaccctgccggccctactggaagagcct
ttacgggagggctttttgccattcattacggccaaaaatccggcccaggccctggaagcc
ttcggcggattccgcgtcctgtgcggagtgcggcaaggcccctgggggatgaactcggcc
aacagcctggtggaggacatcttcgcccgggacggtctgattttgctgcggaattatccc
tggtacgaaaaaaggccggtggtggtcaatcgcaacgacgcggaaatgaatttgtttaac
ggcgaccacggagtctatatggacggcaaggcggcctttccgggcctgcaggaggagctt
cggcattacgccagatccatgctgcccgcccacgacactgcctttgccatgaccgtgcat
aaaagccaaggatcggaatttgaatccgtactgctgattctgccgggggagaactcgccg
gtgctcaccagggaattgctttatacggccgtcacccgcacccggtccaggctgcggatc
gtgggcgccatgccctccattaaaaaggcggtcctaagccccacccgccggccttccggc
ttgcaggacgcattgtggaaaacggaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DAL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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