KEGG T01454: Desac

Desulfobacca acetoxidans DSM 11109: Desac_0602

Entry

Desac_0602 CDS T01454

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

dao Desulfobacca acetoxidans DSM 11109

Pathway

dao00300	Lysine biosynthesis
dao00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:dao00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:dao00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(712420..714015)

AA seq 531 aa
MSGLDGPAGKNLAQLLSGLKYLRIWGDEQVPVQGLAYHSGRVASGEVFVALKGCQTDGHL
YIDKAIERGAAVVVLEDAVEPTPGVVCVQVPDTRLALAHMAAAFYDHPSCNLTVVGITGT
NGKTTTSYLLEAIWQASGAQVGVIGTVNCRFGSQVRSSPVTTPESLDLQDLLAEMRAAAV
DCAIMEVSSHALDLKRVQAVRFAAGLFTNLSQDHLDYHGDMESYFAVKSRLFCELLTDCG
DGPQLAVINRDDPWGQKLLPQTSPPVLTYGFAAGADIRPEDITLTHQGIQARLHTPYGRL
DIVSPLMGRYNLYNILAASGAALGLGISPEHVVTGLANITGVDGRLEPVAAPGQPLVLVD
YAHTPDALEKVLAALKALDFDRIITVFGCGGDRDRRKRPLMGQVVARGSDVVIITSDNPR
TEEPLAIIEDILAGLREMNCPRLDVSEAREGHRGYLVIADRRQAIRQAIAIGNPGEVILL
AGKGHETYQILGTRRIHFDDREEAAAALSARAKNVTDPDKLRQAANRRKGA

NT seq 1596 nt +upstreamnt +downstreamnt
ttgtccggattagacggcccagccggtaaaaacctggcacaactcttgagtgggttgaag
tatctgcgtatctggggagacgaacaggtcccggttcagggattggcttaccattccggc
agagtagcctcgggtgaggttttcgtagccctcaagggctgccaaacagatggtcatctc
tatatcgacaaggctatcgagagaggcgcagccgtcgtggtgctggaagatgcagtcgaa
cctactcctggagtggtttgcgttcaagttcctgatacccgcctggcactggcgcatatg
gcggcggccttttatgatcatccttcttgcaacctgaccgtggtcggcattaccggcaca
aacggcaaaaccacgacatcgtatctgttagaggctatctggcaggccagcggcgcccaa
gtgggggttatcggcaccgtgaactgccgtttcggttcccaggtgcgctcctcgccggta
acgacgccggagtcgctggacctgcaagatttactggctgaaatgcgggctgccgcggtt
gattgcgccataatggaggtatcctctcacgccctggatttgaagcgggtgcaggcggtg
cggtttgctgcgggactgttcaccaatctatcgcaggaccatctggattatcatggcgat
atggaatcgtattttgccgttaagagccgtcttttctgcgaactgttgacagactgtggc
gatggcccgcagttggcggtgatcaatcgggatgacccctgggggcagaaactgctgccg
cagacctcgccgccggtgttgacctatgggtttgccgcgggcgctgatatccggccagag
gacattaccctgacgcaccagggtattcaggctcggttacatactccctatggcagattg
gacattgtttcgcccctgatgggtcgctacaatctctataatatccttgccgccagcgga
gcggccctgggtctggggatcagtccggagcacgtagtcaccgggttggccaacatcacc
ggggtggatggcagattagagccggtagcggcgcccggacagcccctggtcttggttgac
tatgcccatacgccggacgccctggagaaagtcctggccgctttaaaggcactagatttc
gaccggataatcactgtcttcggctgcggcggcgatcgggaccggcgcaaacgccccctg
atgggccaggtggtggcccggggcagcgatgtggtcataattaccagcgacaacccgcgt
acggaggagcctttagcaatcatcgaagatattcttgcaggcttgagagagatgaactgc
ccccgactcgatgtttctgaagctcgagagggtcaccggggctatctggtgattgccgac
cgccggcaggctatccgtcaggcgatcgccatcggcaatcctggtgaggttatcttactg
gccggtaaaggacacgaaacctaccagatactgggaaccaggcggattcattttgatgat
cgggaagaagcggcggcggcgttatctgccagggccaaaaatgtaacagatcctgacaag
ctgcgacaagctgccaatcggaggaagggggcatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DAO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system