KEGG   Desulfobacca acetoxidans: Desac_1797
Entry
Desac_1797        CDS       T01454                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
dao  Desulfobacca acetoxidans
Brite
KEGG Orthology (KO) [BR:dao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dao03019]
    Desac_1797
   03009 Ribosome biogenesis [BR:dao03009]
    Desac_1797
   04131 Membrane trafficking [BR:dao04131]
    Desac_1797
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dao04147]
    Desac_1797
Messenger RNA biogenesis [BR:dao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Desac_1797
Ribosome biogenesis [BR:dao03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    Desac_1797
Membrane trafficking [BR:dao04131]
 SNARE
  SNARE associated proteins
   Others
    Desac_1797
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    Desac_1797
Exosome [BR:dao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Desac_1797
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 AAA_14 CDC48_2 AAA_22 AAA_2 nSTAND3 TIP49 AAA_33 AAA_28 RNA_helicase IstB_IS21 Zeta_toxin Mg_chelatase AAA_18 NACHT Sigma54_activat AAA_7 AAA_17 NB-ARC ATPase TsaE Parvo_NS1 ABC_tran Rad17 ATPase_2 AAA_19 Viral_helicase1 NTPase_1 AAA_3 Sigma54_activ_2 SLFN-g3_helicase AAA_11 bpMoxR Molydop_binding
Other DBs
NCBI-ProteinID: AEB09637
UniProt: F2NI11
Position
complement(2003883..2006030)
AA seq 715 aa
MKKEPEMTLKLKVTEALSKDVGRAYARMGPEDMEKLELSIGDIIEVAGKRKTVCKAMPAY
KELRGRSRIQLDGISRENAGAGLDDSVLVSKITCRPGTRVVLAPITITPADRDLPYIGSL
LDGLPVREGDRIRATLFGSRTADFKVESLTPPGPVLINPTTTLVIGKAGGVVEGRRPAAV
SYEDVGGLKPQLQRIREMIELPLRYPELFERLGIDAPKGVLLHGPPGCGKTLIARTIAHE
TEANFFSVSGPEVVHKFYGESEAHLRKIFEEASRKGPSIIFMDEIDAIAPRREKVVGDVE
KRVVAQLLALMDGLNKRQNVIVIAATNIPNALDPALRRPGRFDREIAIPIPDRHGRLDIL
EIHSRGMPLSENVDMGHLAEITHGFVGADLEALCREAAMICLRRLMPEIDYGLSTIPYEQ
LAQLEVHMDDFLGALREVEASAIREVFVEVPDVRWEDVGGLREVKDRLQEAVEWPLKYTY
LFKKAGIKPPKGILLTGPPGCGKTLLAKAIATESRVNFLSVKGPALISKYVGESERGVRE
MFRTARQAAPCIIFLDETEALLPARGAGGSDSHVSERVLSQFLAELDGIEELKGVLVLGA
TNRLDMMDPAVLRPGRFDEIITIHLADAEDRREIFAVHLRDKPLAKGINPAELAARTEGL
SGAEIAAVCSKAALSAVRRAVMAEIAQEGTGLEQVLILPEDIEEALHEMLGNQEN
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgaaaaaagaaccagagatgactctcaagttaaaagtaacggaggccctgagtaaagac
gtgggtcgggcctatgcccgtatggggccggaagatatggagaaactcgagctatcgatc
ggcgatattatcgaagtggcgggcaagcggaaaaccgtttgtaaagccatgccggcctat
aaggagttgcggggccgatcccgcatccaattggacggcatcagccgggagaacgccggg
gcgggtttggacgattcggtgctggtctctaagatcacctgccgtcctggcacgcgggtt
gtcctggcaccgatcaccattactccggcggatcgcgatctgccatatatcggcagcctg
ctggacggcctgccggtaagggagggagaccgcatccgggccaccctgtttggcagccgc
accgcagattttaaggtggaaagcctgactcctccggggccggtgttgatcaatcctacc
accaccctggtgatcggcaaggcgggaggcgttgttgagggccgtcgtccggcagccgtg
tcgtacgaagatgtggggggtctcaaacctcaacttcagcgcattagggaaatgatcgaa
ctacctttgcgttaccctgagttgttcgagcgtttgggcatcgacgccccgaaaggggta
ttgctgcatggcccgccaggttgcggcaagactctgattgcccgcaccattgcccatgag
actgaggcaaacttcttctcggtgagtggaccggaggtagtgcataagttttacggtgaa
tccgaggcccacttgcgcaagatctttgaagaggcctctcgtaagggtcccagcatcatc
tttatggatgaaatcgatgccatcgccccgcggcgggagaaggtggtaggggacgtggag
aaacgggtggtggcccaactcctggccttgatggacggactcaataaacggcagaatgtt
attgtcatcgccgccaccaatatccccaacgccctggatccggccttgcggcggccgggt
cgatttgaccgcgagatcgccatccccattcccgatcgccacggtcggttggatatcctg
gaaattcacagtcgaggtatgcccttgtccgagaatgtcgacatgggtcatctggcagaa
atcacccacgggtttgtcggagccgacctggaggccttgtgccgggaagcggccatgatc
tgtctgcgccgccttatgcccgagatagattacggtctgtctactatcccttacgaacag
ttggcgcaactggaagtacacatggacgattttctgggagcgctgcgggaggtggaggcc
tcggccatccgggaagtattcgttgaggtcccggacgttcgctgggaagacgtcggcggt
ctgcgggaggtcaaagatcgcctgcaggaagcggtcgagtggcctctcaagtacacctat
cttttcaaaaaagcagggataaaacctcccaaggggatccttctgaccggaccgccgggt
tgcggcaagaccttgctggccaaggccattgcaaccgaaagccgggtgaatttcctttcg
gtgaaaggtccggccctcatttccaaatatgtcggcgaatcagagcggggagtgcgagag
atgtttcgcaccgcccggcaggcggcgccttgtatcatcttcctggacgagaccgaagca
ttattgccagcccgaggcgctgggggctcagactcgcatgtctccgaacgggttctcagt
cagtttctggcagaattggacggcattgaggaattaaaaggcgtactggttctgggggct
accaaccgcctggacatgatggacccggcagtcttgcggccggggcgttttgacgagatc
atcaccattcacctggctgatgcagaagaccggcgggagatctttgccgttcatctgcgc
gacaagcccttggccaagggtattaacccggcagagctggcggcgcgcaccgaaggtctg
agcggggcggagattgcggcggtctgcagcaaggctgccctcagtgcagtgcggcgggcg
gtgatggccgaaattgcccaggaaggcacgggcttggagcaggtgcttatcctgccggag
gatattgaagaggccctgcacgagatgttggggaatcaggagaactaa

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Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (65)   

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