KEGG T01189: Dacet

Denitrovibrio acetiphilus: Dacet_1903

Entry

Dacet_1903        CDS       T01189

Name

(GenBank) radical SAM enzyme, Cfr family

K06941

23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]

Organism

dap Denitrovibrio acetiphilus

Brite

KEGG Orthology (KO) [BR:dap00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dap03009]
    Dacet_1903
Enzymes [BR:dap01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     Dacet_1903
Ribosome biogenesis [BR:dap03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Dacet_1903

SSDB

Motif

Pfam:

Radical_SAM RlmN_N Radical_SAM_2

Other DBs

NCBI-ProteinID:

ADD68667

UniProt:

D4H104

Position

complement(2006623..2007696)

AA seq 357 aa
MPENIYLDSMNKFELENFVISQGMQKFRAIQIHKWVYRRGAESVAEMTDLSIADREKLLG
MAKFTVMNVADVRKSAMDGSVKFLFSLEDGETIEAVVLNDGRRLTACISSQVGCRMGCAF
CSTAKMGLRRNLTMGEIIKQVKRLNEYLASEGTKLNNLVFMGMGEPLDNLDNVKNAINVL
LDDDGYGFSHKKITLSTCGLTDRLEELFAMDTPVNLAVSVNAADQETRKGLMPVSNKYPL
SGLMDVLKKLPLQKRKSITIEYVLLRGVNDTLDDARKLAKLLRGLDKVKINLITYNSGGD
AGYLPPSEKDTLKFQEYLISNKIGVFIRKSLGRDIEGACGQLRAKHDESQKSEDCSE

NT seq 1074 nt +upstreamnt +downstreamnt
atgccagaaaatatctatttagattcaatgaataagtttgaacttgagaattttgttata
tctcaggggatgcagaaattccgggcaatccagattcataaatgggtttaccgcagaggg
gctgaatctgttgctgagatgactgatctgtctatcgctgatagagaaaagctcttgggg
atggcgaaatttacggtcatgaatgttgcagatgtcagaaagtctgccatggacggctct
gttaagtttttgttttcccttgaagacggcgagaccatagaggcagtagtgcttaatgac
gggcgtcgtcttactgcctgcatatcctcacaggttggatgccgtatgggttgtgctttt
tgttccacagctaagatggggctcaggcgcaaccttactatgggtgagattattaaacag
gtcaaaaggctgaatgaatatcttgcgtctgagggcacaaagctgaataatctcgttttt
atggggatgggcgagcctcttgataatcttgataatgtaaagaatgcaataaatgtgctg
ctggatgatgatggttacggcttttctcataaaaaaataacactttcaacatgcggactg
acagacaggcttgaagagctatttgctatggatacccctgttaatcttgctgtttctgtg
aatgcagcagaccaggagaccagaaaggggctaatgcctgtttctaataaatatccgttg
agcgggcttatggatgttttgaaaaaactccctctgcaaaaacggaaaagcatcacaatt
gagtatgttcttttaagaggtgtgaacgacactcttgacgatgctcgtaaacttgctaaa
ctgcttagagggcttgataaggtcaagataaaccttataacatataactccggaggagat
gcaggttacctgccgccttcggaaaaagatactttgaaatttcaggaatatctgataagt
aacaagattggtgtatttataagaaaatctctggggcgtgacatagaaggagcctgcggg
cagctcagagcaaaacatgatgaatcacaaaagtcggaggactgcagtgagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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