KEGG   Pseudodesulfovibrio aespoeensis: Daes_1233
Entry
Daes_1233         CDS       T01382                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
das  Pseudodesulfovibrio aespoeensis
Pathway
das03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:das00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Daes_1233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:das03400]
    Daes_1233
DNA repair and recombination proteins [BR:das03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Daes_1233
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR GIY-YIG HHH HHH_2 RecR_HhH 5_3_exonuc
Other DBs
NCBI-ProteinID: ADU62247
UniProt: E6VU54
Position
1406739..1408553
AA seq 604 aa
MAVTQEFKFFAADYPDSPGVYLMKNARGRIIYVGKAKRLRRRLASYFQKSSGLTPKTLAL
VGQVCAVDVLLTGTEKEALLLEEGLIKKHRPRYNVVLKDDKQYVLFRLDRKAEFPRLSVT
RKVVRDGSVYFGPFTSGAAARTTWKLLGKVFPLRKCSDHVFRNRVRPCLYHHLHQCLAPC
VLNVDRAVYKDMVRRVEMLLSGKSGELLTTLEKRMAEASAAMEYEQAALLRDQIRAVRQT
VEGQVAVCHDTRDRDVLGLAASESGLGLGLLFIRQGRLLDEKQFFWPGLTLDEGPEVIQS
FVMQFYGAARFIPPMIIVPYEMVEPLVAEVLAERRTGPVRLVLPRTTQEKKLLELARDVA
RQARQRRDSISARLARALNLPAEPERIECVDASHLGGSDMRVGQVVFEAGRRDREASRLY
AFPDLEGTGDDYAALAAWARRRVESGPPWPDLVLIDGGRGQLAAVERALSECVEETCWEL
VAIAKGPSRRAGELEDVVFRPGRKNPMPLKPGSAELLFLQMVRDTAHRFVLGRQRIARKK
TVLQSELTLLPGIGPKTARLLWDRFESLDAMLAADPQAIRALPGIGGKKAELIHAALQKL
RATG
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggccgtgacccaggagttcaaattttttgccgccgactatcccgactcgccgggtgtg
tatctgatgaagaacgcgcgcgggcggatcatctatgtgggcaaggccaagcggctcagg
cggcggctggcctcgtactttcagaaaagctctgggctgacccccaagaccctggccctg
gtcgggcaagtgtgcgcggtggacgtgctgctgaccgggaccgagaaggaggccctgctc
ctggaggaggggctgatcaagaagcaccggccccgctacaacgtggtcctcaaggacgac
aagcagtatgtgctcttccggctggaccggaaggccgaattccccaggctgtccgtgacc
cgcaaggtggtgcgcgacgggtcggtctatttcgggccgttcacttcgggcgcggcggcc
aggaccacctggaagctgctgggcaaggtctttcccttgcgcaagtgctcggaccatgtc
ttccgcaaccgggtcaggccgtgcctctatcaccatctgcatcagtgcctcgcgccgtgc
gtgctcaatgtggaccgggccgtgtacaaggatatggtccggcgcgtggagatgctcctc
tccggcaagtcgggcgagctgctgaccaccctggagaagcgcatggccgaagcctcggcg
gccatggagtacgagcaggcggcgctcttgcgcgaccagatccgggcggtgcggcagact
gtggaaggacaggtggccgtgtgtcacgacacccgcgaccgcgacgtgctggggctggcc
gccagcgagagtggcctggggctcggtctgctcttcatccgccagggcagactcctggac
gaaaagcagttcttctggccggggttgaccctggacgaggggccggaggtgatccagagt
tttgtgatgcagttctacggcgcggcccggtttatcccgccgatgattattgttccctat
gagatggtggagccgctggtggccgaggtgctggccgagcggcgcaccggcccggtgcgc
ctcgtcctgccccggacaacgcaggagaagaaactgctggaattggcccgcgacgtggcc
cggcaggctcgtcagcgcagggattccatctcggcccggctggcccgcgccctcaacctg
cccgccgagccggagcgcatcgagtgcgtggacgcctcgcacctgggcggcagcgacatg
cgcgtggggcaggtggtgttcgaggccgggcggcgcgacagggaagcatcaaggctctac
gcctttcccgacctggaagggacgggcgacgactacgcggccctggccgcctgggcgcgc
aggcgggtggagtctggcccgccgtggcccgatctggtgctcatcgacggcggcaggggg
cagctggccgccgtggagcgggccttgagcgaatgcgttgaagagacctgctgggagctg
gttgccatcgccaaggggccgtcgcgccgggcgggcgagctggaggatgtggtcttcagg
ccggggcgcaagaatcccatgccgctgaaacccggcagcgctgaattgttgtttttgcag
atggtgcgcgatacggcccaccgtttcgtgctcggcaggcagcgcatcgcgcgcaagaag
acggtgctgcaaagcgagctgaccttgctgccgggcatcgggccgaagacggcgcggctg
ttgtgggatcggttcgagtcgctcgacgccatgctggcggctgatccccaggccatccgc
gccctgcccggcatcggcgggaaaaaggcggagctgatccacgcggccctgcaaaagctc
agggcgacggggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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